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TranscriptomicsGenome-wide analysis of miRNA-associated transcriptome profiles in multiple cell models
Schizophrenia-associated miRNA were bidirectionally modulated in HEK-293, HeLa, and SH-SY5Y cell models. Results provide important insights into the current understanding of miRNA function in various cellular environments. Total RNA was obtained from HEK-293, HeLa, and SH-SY5Y cells at 24hrs post-tr...
ORGANISM(S): Homo sapiens 
2012-11-01 | E-GEOD-37729 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of SALK_084897 or SAIL_303_D08 Arabidopsis plants grown under normal conditions or with moderate light and drough treatment applied
4 week old Arabidopsis plants, of ecotype Columbia, SALK_084897 or SAIL_303_D08 were either grown under normal conditions or grown under normal conditions for before having a moderate light and drought treatment applied. Light and drought treatment was applied by withholding water for 5 days prior t...
ORGANISM(S): Arabidopsis thaliana 
2008-04-30 | E-ATMX-32 | biostudies-arrayexpress
ProteomicsZhang et al - 2024 - Systems analysis of long-term heat stress responses in the C4 grass Setaria viridis
These data are associated with the following peer-reviewed scientific paper: Peng Zhang, Robert Sharwood, Adam Carroll, Gonzalo M Estavillo, Susanne von Caemmerer and Robert T Furbank (2024) Systems analysis of long-term heat stress responses in the C4 grass Setaria viridis, The Plant Cell Corresp...
ORGANISM(S): Setaria Viridis (ncbitaxon:4556) 
2024-12-09 | MSV000096617 | MassIVE
Unknownα-1 Antitrypsin regulates human neutrophil chemotaxis induced by soluble immune complexes and IL-8.
Not available
S-EPMC2993580 | biostudies-literature
ProteomicsProteomic analysis of Raptor-proximal proteins in U2OS cells
The mammalian target of rapamycin complex 1 (mTORC1) is a key nutrient-sensing hub and a master regulator of cellular growth and metabolism. Activation of mTORC1 by amino acids and growth factors requires its recruitment to the lysosomes. Furthermore, lysosomal distribution has been shown to be inti...
ORGANISM(S): Homo sapiens (Human) 
2021-09-08 | PXD012795 | Pride
Mtorc1 Raptor Ms Q exactive plus Proximity labelling Proximity-based biotinylation Human Bioid Bioid2 Osteosarcoma Lc-ms/ms 
ProteomicsC. testosteroni aromatic compound metabolism
Data comparing protein expression during growth of Comamonas testosteroni Kf1 on succinate with growth on 3 aromatic substrates (vanillate, terephthalate, 4-hydroxybenzoate). Quantification by diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry).
ORGANISM(S): Comamonas Testosteroni Kf-1 (ncbitaxon:399795) 
2021-11-19 | MSV000088418 | MassIVE
TranscriptomicsMice Exposed in situ to Urban Air Pollution Exhibit Pulmonary Alterations in Lipid Droplet Synthesis Pathways
In the present study, we investigate pulmonary transcriptional responses in mice following exposure in situ to ambient air in a heavily polluted urban environment. Mature C57BL/CBA male mice were caged in sheds located in an urban area near two working steel mills and a major highway in Hamilton, On...
ORGANISM(S): Mus musculus 
2013-09-30 | E-GEOD-41698 | biostudies-arrayexpress
UnknownDiscovery of an Anion-Dependent Farnesyltransferase Inhibitor from a Phenotypic Screen.
Not available
S-EPMC7812668 | biostudies-literature
ProteomicsComamonas KF-1 PET degradation
Cellular and extracellular fractions of Comamonas testosteroni KF-1 grown on PET +/- acetate, labeled via diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry) for protein expression quantitation
ORGANISM(S): Comamonas Testosteroni Kf-1 (ncbitaxon:399795) 
MSV000095794 | MassIVE
ProteomicsPseudomonas putida strains on glucose, aromatics & mixtures
Growth of Pseudomonas putida KT2440 and mt2 on glucose, coumarate, ferulate, and glucose+coumarate & glucose+ferulate mixtures. Quantitation by diDO-IPTL (Waldbauer et al. Anal Chem 2017).
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) Pseudomonas Putida Group (ncbitaxon:136845) 
2023-04-21 | MSV000091772 | MassIVE
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