Carter B B - OmicsDI

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Unknown (2594)
Transcriptomics (217)
Proteomics (51)
Genomics (26)
Metabolomics (3)
Genomic (1)

Organisms

Homo sapiens (115)
Mus musculus (98)
Rattus norvegicus (10)
Arabidopsis thaliana (6)
Pimephales promelas (5)
Clostridium botulinum (3)
Schizosaccharomyces pombe 972h- (3)
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Pan troglodytes (2)
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Escherichia coli (2)
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microbial mat metagenome (2)
Mustela putorius furo (1)
Micropterus salmoides (1)
Marmota monax (1)
Leishmania donovani (1)
Strongylocentrotus purpuratus (1)
Macaca mulatta (1)
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Saccharomyces cerevisiae (1)
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Danio rerio (1)
Acinetobacter baumannii ATCC 17978 (1)
Allochromatium vinosum DSM 180 (1)
Bacteria (1)
Cucurbita maxima (1)

Organisms

Mus musculus (5)
Homo sapiens (2)
Hyalella azteca (1)

Repository

biostudies-arrayexpress (218)
pride (45)
EGA (16)
ENA (9)
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geo (1)
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Tissue

Cell culture (8)
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Disease

Acute myeloid leukemia (6)
Normal (3)
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Disease free (2)
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Burkitt lymphoma (1)
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Toxoplasmosis (1)

Technology Type

Mass Spectrometry (45)
Shotgun proteomics (19)
Bottom-up proteomics (7)
Top-down proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-independent acquisition (3)
SWATH MS (3)
Mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Gel-based experiment (2)
AB SOLiD System 3.0 (1)
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Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
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SRM/MRM (1)

Instrument Platform

ScanArray Express HT (2)
GenePix 4000B [Axon Instruments] (2)
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G2500A GeneArray scanner [Agilent Technologies] (1)
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TripleTOF 5600 (1)
Gas Chromatography MS - positive (1)
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MaXis (Bruker) (1)

Publication Date

2010 (28)
2012 (27)
2014 (25)
2011 (25)
2008 (25)
2013 (20)
2015 (13)
2005 (13)
2023 (13)
2009 (12)
2007 (10)
2006 (8)
2021 (8)
2016 (7)
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2024 (6)
2026 (5)
2018 (5)
2004 (5)
2017 (3)
2019 (3)
2022 (3)
2020 (1)
2003 (1)
2002 (1)

UNIPROT ID/AC

8030.ENSSSAP00000000096 (1)
8030.ENSSSAP00000000573 (1)
8030.ENSSSAP00000001022 (1)
8030.ENSSSAP00000001240 (1)
8030.ENSSSAP00000001597 (1)
8030.ENSSSAP00000001915 (1)
8030.ENSSSAP00000002059 (1)
8030.ENSSSAP00000002148 (1)
8030.ENSSSAP00000002253 (1)
8030.ENSSSAP00000002671 (1)
8030.ENSSSAP00000002680 (1)
8030.ENSSSAP00000002684 (1)
8030.ENSSSAP00000002690 (1)
8030.ENSSSAP00000002813 (1)
8030.ENSSSAP00000003619 (1)
8030.ENSSSAP00000004421 (1)
8030.ENSSSAP00000004518 (1)
8030.ENSSSAP00000004639 (1)
8030.ENSSSAP00000004862 (1)
8030.ENSSSAP00000004890 (1)
8030.ENSSSAP00000005034 (1)
8030.ENSSSAP00000005299 (1)
8030.ENSSSAP00000005382 (1)
8030.ENSSSAP00000005521 (1)
8030.ENSSSAP00000005671 (1)
8030.ENSSSAP00000006110 (1)
8030.ENSSSAP00000006522 (1)
8030.ENSSSAP00000006671 (1)
8030.ENSSSAP00000006691 (1)
8030.ENSSSAP00000006723 (1)

CHEBI ID

CHEBI:14737 (1)
CHEBI:15346 (1)
CHEBI:15351 (1)
CHEBI:15468 (1)
CHEBI:15531 (1)
CHEBI:16065 (1)
CHEBI:16546 (1)
CHEBI:16958 (1)
CHEBI:27266 (1)
CHEBI:7916 (1)

Metabolite Name

161.096@8.03 (1)
191.143@8.09 (1)
205.08@5.21 (1)
363.069@5.95 (1)
440.0420@4.43min (1)
471.083@4.43 (1)
Acetyl-CoA (1)
Beta-alanine (1)
Coenzyme A (1)
Dephospho-CoA (1)
Hydroxycamalexin hexoside1 (1)
Hydroxycamalexin hexoside2 (1)
Malonyl-coa (1)
Pantothenate (1)
Scopolin (1)
Sinapoylglucose (1)

First Public Date

2024 (2)
2025 (1)
2023 (1)
2022 (1)
2019 (1)
2018 (1)
2014 (1)
2013 (1)

Modification

-17.026549 (1)
15.994915 (1)
31.989829 (1)
42.010565 (1)
57.021464 (1)
79.966331 (1)

Study type

Transcription profiling by array (147)
Comparative genomic hybridization by array (29)
Unknown experiment type (9)
RNA-seq of coding RNA (9)
MicroRNA profiling by array (7)
Genotyping by array (5)
ChIP-chip by array (4)
Methylation profiling by array (3)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Other (1)
ChIP-seq (1)

Release Date

2022 (283)
2021 (278)
2023 (250)
2024 (242)
2025 (201)
2020 (180)
2019 (162)
2018 (160)
2014 (142)
2017 (139)
2016 (131)
2015 (122)
2011 (87)
2013 (81)
2012 (74)
2010 (66)
2009 (48)
2008 (47)
2026 (35)
2007 (34)
2005 (14)
2006 (11)
2004 (11)
2000 (5)
2003 (3)
2002 (3)
2001 (2)
1998 (1)

Lab affiliation

Murray and Martha Ross Professor of Environmental Sciences, Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA USA (3)
Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne, Australia. (2)
1Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA. Department of Neurosurgery, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA (1)
1Thoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD, USA (1)
Assistant Professor of Microbiology, Immunology, and Cancer Biology Associate Director for Diversity, Equity, and Inclusio at the Carter Immunology Center University of Virginia Charlottesville, VA (1)
Associate Professor, Microbiology, Immunology, and Cancer Biology Carter Immunology Center University of Pittsburgh (1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, Berlin, Germany (1)
Biotechnology and Bioengineering Center, Deptartment of Microbiology, Medical College of Wisconsin (1)
Cancer Sciences, Faculty of Medicine, University of Southampton, UK (1)
Cardiovascular Proteomics Laboratory & Proteomics Unit Centro Nacional de Investigaciones Cardiovasculares Madrid, Spain (1)
Centre for Cancer Cell and Molecular Biology Barts Cancer Institute, Queen Mary University of London Charterhouse Square, London EC1M 6BQ, The United Kingdom. (1)
Centre for Genomics and Computational Biology Barts Cancer Institute Queen Mary, University of London John Vane Science Centre, Charterhouse Square, London EC1M 6BQ Tel: +44 (0)20 7882 8266 (1)
Chemistry Department, University of Minnesota (1)
Clinical and Experimental Sciences Unit, Faculty of Medicine, University of Southampton, Southampton SO16 6YD, UK Centre for Proteomic Research, Institute for Life Sciences, University of Southampton, Highfield Campus, Southampton, SO17 1BJ, UK (1)
College of Horticulture, China Agricultural University, China (1)
Department of Biochemistry Biophysics and Molecular Biology, Iowa State University, Ames, IA, USA (1)
Department of Microbiology, Immunology and Cancer Biology and the Carter Immunology Center, School of Medicine, University of Virginia, USA. (1)
Department of Pharmacology and Lineberger Comprehensive Cancer Center at University of North Carolina at Chapel Hill (1)
Department of Pharmacy and Biotechnology - University of Bologna (1)
Department of Plant & Microbial Biology, University of Minnesota (1)
Departments of Biochemistry & Molecular Biology and Microbiology & Immunology Medical University of South Carolina USA (1)
Dept. Cellular Molecular Pharmacology, University of California - San Francisco (UCSF), USA (1)
Dept. Cellular Molecular Pharmacology, University of San Francisco (UCSF), USA (1)
Dept. Cellular and Molecular Pharmacology, University of California - San Francisco (UCSF), USA (1)
Epithelial Systems Biology Laboratory Systems Biology Center Division of Intramural Research National Heart, Lung and Blood Institute Building 10, Room 6N307 Bethesda, Maryland 20895-1603 (1)
Epithelial Systems Biology Laboratory Systems Biology Center National Heart, Lung and Blood Institute Bethesda, Maryland 20895-1603 (1)
Institute of Cancer Research (1)
Karolinska Institutet (1)
Montana State University (1)
School of Medicine and Multidisciplinary Cardiovascular Research Centre University of Leeds United Kingdom (1)

Tags

xref:PubMed:31843910 (1)
xref:PubMed:24065824 (1)
xref:PubMed:35935999 (1)
xref:PubMed:22561152 (1)
xref:PubMed:39581457 (1)
xref:PubMed:38601144 (1)

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Differentially expressed genes in B-1b compared to B-1a

PRJNA853319 | ENA

Integrated cellular and plasma proteomics reveals common and systemic signatures in contrasting B-cell cancers

Approximately 800,000 leukaemia and lymphoma cases are diagnosed worldwide each year. Burkitt’s lymphoma and chronic lymphocytic leukaemia represent contrasting examples of B-cell cancers, modelled by Eμ-myc and Eμ-TCL1 mice, respectively. To better understand B-cell cancers and systemic effects of ...

ORGANISM(S): Mus musculus (Mouse)

2017-01-10 | PXD004608 | Pride

Loss of TET2 increases B-1 cell number and IgM production while limiting CDR3 diversity.

Not available

S-EPMC11004297 | biostudies-literature

Protective Role for B-1b B Cells and IgM in Obesity-Associated Inflammation, Glucose Intolerance, and Insulin Resistance.

Not available

S-EPMC4808436 | biostudies-literature

Transcription profiling of mouse, bovine and xenopus germinal vesicle stage oocytes reveals a high degree of conservation among species

Comparative analysis of bovine, mouse and xenopus oocyte transcript profiles. The results from bovine and xenopus germinal vesicle stage oocytes in this experiment were compared to previously-published microarray data on preimplantation development in the mouse (Carter 2003).

ORGANISM(S): Xenopus laevis

2008-02-01 | E-MEXP-1339 | biostudies-arrayexpress

B-1b Cells Secrete Atheroprotective IgM and Attenuate Atherosclerosis.

Not available

S-EPMC4527334 | biostudies-literature

Helix-loop-helix factor inhibitor of differentiation 3 regulates interleukin-5 expression and B-1a B cell proliferation.

Not available

S-EPMC4003558 | biostudies-literature

Loss of TET2 increases B-1 cell number and IgM production while limiting CDR3 diversity

PRJNA1072997 | ENA

Loss of Id3 (Inhibitor of Differentiation 3) Increases the Number of IgM-Producing B-1b Cells in Ischemic Skeletal Muscle Impairing Blood Flow Recovery During Hindlimb Ischemia.

Not available