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ProteomicsLow dose ribosomal DNA P-loop mutation affects development and enforces autophagy in Arabidopsis
Arabidopsis contains hundreds of ribosomal DNA copies organised within the nucleolar organising regions (NORs) in chromosomes 2 and 4. There are four major types of variants of rDNA, VAR1-4, based on the polymorphisms of 3' external transcribed sequences and these are variably expressed during plant...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2024-01-26 | PXD035623 | Pride
Autophagy / crispr / development / plants / rrna 
ProteomicsSpatial distribution of proteins and metabolites in developing wheat grain and their differential regulatory response during the grain filling process
Grain filling and proper grain development are essential biological processes in the plant’s life cycle, which majorly contributes to the final seed yield and quality in all cereal crop. However, very scarcely this knowledge is available in the literature regarding how the different wheat grain comp...
ORGANISM(S): Triticum aestivum (Wheat) 
2022-02-23 | PXD025761 | Pride
Seed coat Triticum aestivum Embryo Proteomics Metabolomics Grain filling Seed development Cavity fluid Wheat Endosperm 
ProteomicsHigh-throughput phenotypHigh-throughput phenotyping and integrative multi-omics analysis of potato under single- and combined abiotic stresses reveals distinct signatures
Potato, the most important non-cereal crop, is highly water and space efficient but susceptible to abiotic stress such as heat, drought, or flooding. Due to climate change the likelihood of such stresses to occur, individually, sequentially, or simultaneously, has dramatically increased. While we ha...
ORGANISM(S): Solanum tuberosum (Potato) 
2024-12-11 | PXD052587 | Pride
Panomics Heat Multi-omics Potato Waterlogging Solanum tuberosum Adaptomics Pan-omics Abiotic stress responses Drought Multiomics Integrative omics 
ProteomicsUncovering the protein alterations in anther tissues of three contrasting rice types in response to short-term and long-term heat stress conditions
Heat stress drastically affects anther tissues resulting in poor plant fertility, necessitating an urgent need to determine the key proteins associated in the response of anthers to heat stress. Employing quantitative proteome analysis, we identified several cultivar-specific protein alterations in ...
ORGANISM(S): Oryza sativa (Rice) 
2023-02-17 | PXD035952 | Pride
Nagina 22 rice Ir64 rice Heat stress Anthers Proteomics Lc-ms/ms Moroberekan rice Reproductive thermotolerance 
ProteomicsCell-type resolution proteomics for functional annotation of the grain filling process in wheat endosperm
Grain development is a key life cycle stage of many plants. The development of seeds is the basis of agriculture and the primary source of calories consumed by humans. Here, we employ laser micro dissection (LMD) combined with shotgun proteomics to generate a cell-type proteome atlas of developing w...
ORGANISM(S): Triticum aestivum (Wheat) 
2024-12-11 | PXD035848 | Pride
Proteomics Laser micro dissection (lmd) Starchy endosperm Transfer cells Wheat Sub aleurone Aleurone 
TranscriptomicsComparative analysis of Papaver somniferum genotypes having contrasting latex and alkaloid profiles
Sampada and Sujata are two contrasting genotypes of Papaver somniferum that are contrasting in terms of their latex and alkaloid profiles. The major objective of the present study was to use a small-scale (750 target genes) microarray of P. somniferum for identification of genes that are differentia...
ORGANISM(S): Papaver somniferum 
2013-12-30 | E-GEOD-37983 | biostudies-arrayexpress
ProteomicsIntegrated multi-omics analysis reveals drought stress response mechanism in chickpea (Cicer arietinum L.)
Drought is one of the major constraints for crop productivity across the globe. Chickpea (Cicer arietinum L.) is mainly cultivated in the arid and semi-arid tropical regions under rain-fed conditions and drought stress is one of the major constraints, which causes up to 50% yield losses annually. In...
ORGANISM(S): Cicer arietinum (Chickpea) (Garbanzo) 
2023-08-23 | PXD027033 | Pride
Drought stress Signalling pathways Proteomics Metabolomics Integrated multi-omics Gene expression Transcriptomics Chickpea 
ProteomicsComparative physiological and proteomic signatures reveal contrasting stay green and senescence phenotypes in drought tolerant and susceptible pearl millet and wheat genotypes
The marker- and genome-based development of drought resistant and high yield cereal crops is the most pressing activity in a constantly more stress- and harmful environment for plant productivity. Genome-based assisted breeding is only capable to cover 30-40 % of phenotypic variance according to the...
ORGANISM(S): [Pennisetum] glaucum subsp. monodii Triticum aestivum (Wheat) 
2021-02-15 | PXD021446 | Pride
Drought stress Large-scale proteomics Multivariate integrative analysis Stay green trait Pearl millet Mass spectrometry Marker assisted breeding. Cereals Senescence Wheat 
ProteomicsMagnetic field induced changes in the proteomic analysis in barley (Hordeum vulgare)
Geomagnetic field (GMF) has been present since the beginning of plant evolution. Recently, some researchers have focused their efforts on employing magnetic fields (MF) higher than GMF to improve the seed germination, growth and harvest of agriculturally important crop plants, as MFs are inexpensive...
ORGANISM(S): Hordeum vulgare (Barley) 
2021-09-09 | PXD022079 | Pride
Barley Growth stimulation Proteomics Magnetic field Hordeum vulgare Geomagnetic field 
UnknownMining and gene ontology based annotation of SSR markers from expressed sequence tags of Humulus lupulus.
Not available
S-EPMC3283882 | biostudies-literature
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