Chen Wei W - OmicsDI

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Unknown (5216)
Proteomics (334)
Transcriptomics (160)
Genomics (79)
Metabolomics (37)
Multiomics (6)
Other (2)
Models (1)
Genomic (1)

Organisms

Homo sapiens (238)
Mus musculus (80)
Caenorhabditis elegans (26)
Rattus norvegicus (14)
Arabidopsis thaliana (12)
Zea mays (4)
Drosophila melanogaster (4)
Ovis aries (3)
Saccharomyces cerevisiae (3)
Oryza sativa (3)
Mycobacterium avium subsp. paratuberculosis (2)
Macaca mulatta (2)
Brassica napus (2)
Oryza sativa Indica Group (2)
Glycine max (2)
Oryza sativa Japonica Group (2)
Nannochloropsis oceanica (1)
Agrobacterium sp. 31749 (1)
Rhodopseudomonas palustris (1)
Tuber melanosporum (1)
Urocitellus parryii (1)
Pristionchus pacificus (1)
Bombyx mori (1)
Chlamydomonas reinhardtii (1)
synthetic construct (1)
Schizosaccharomyces pombe (1)
Nicotiana tabacum (1)
Oryctolagus cuniculus (1)
Heterocephalus glaber (1)
Plasmodium falciparum (1)

Repository

biostudies-arrayexpress (212)
iProX (202)
pride (109)
MetaboLights (34)
EGA (27)
MassIVE (15)
PeptideAtlas (5)
GNPS (3)
GPMDB (2)
PAXDB (2)
BioModels (1)
dbGaP (1)
jPOST (1)

Tissue

Cell culture (25)
Leaf (8)
Liver (8)
Epithelial cell (7)
Blood serum (5)
Heart (5)
Plant cell (5)
Testis (5)
Whole body (5)
Brain (4)
Macrophage (4)
Mesenchymal cell (4)
Others (3)
Early embryonic cell (3)
Male Reproductive System (2)
B cell (2)
Blood cell (2)
Colon (2)
Flower (2)
Hepatocyte (2)
Kidney (2)
Lung (2)
Permanent cell line cell (2)
Spleen (2)
Stem cell (2)
Blood (1)
Blood plasma (1)
Blood platelet (1)
CD8-positive (1)
HeLa cell (1)

Disease

Breast cancer (5)
Colon cancer (5)
Cardiovascular system disease (4)
Disease free (3)
Not Available (2)
Abnormality of prenatal development or birth (1)
Acute leukemia (1)
Esophageal cancer (1)
Liver cancer (1)
Liver cirrhosis (1)
Lung cancer (1)
Lung carcinoma (1)
Osteoarthritis (1)
Polycystic Kidney (1)
Prostate adenocarcinoma (1)
Renal cell carcinoma (1)
Thyroid cancer (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (109)
Shotgun proteomics (61)
Mass spectrometry (29)
Bottom-up proteomics (20)
Data-dependent acquisition (9)
Gel-based experiment (7)
Top-down proteomics (7)
Affinity purification coupled with mass spectrometry proteomics (6)
Mass spectrometry assay (3)
NMR spectroscopy (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
SRM/MRM (2)
SWATH MS (2)
Illumina HiSeq 2500, ILLUMINA (1)
ILLUMINA, Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
All-ion fragmentation (1)
DiaPASEF (1)
MSE (1)
Proteogenomics (1)
RNA mass spectrometry (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (12)
Liquid Chromatography MS - positive - reverse phase (8)
LTQ Orbitrap Elite (6)
Liquid Chromatography MS - positive - hilic (6)
Q Exactive HF (5)
Liquid Chromatography MS - negative - hilic (5)
Q Exactive (4)
LTQ Orbitrap Velos (3)
Illumina HiSeq 2000 (2)
TripleTOF 6600 (2)
Instrument (2)
TOF Pegasus HT (LECO) (2)
Nuclear Magnetic Resonance (NMR) (2)
Xevo G2 QTOF (Waters) (2)
Liquid Chromatography MS - negative (2)
Agilent 2100 bioanalyzer (1)
NanoDrop ND-1000 (1)
Affymetrix Genechip Command Console software (1)
Trizol Reagent (1)
Illumina HiSeq 2500 (1)
LTQ FT (1)
MaXis (1)
LTQ Orbitrap (1)
Orbitrap Fusion ETD (1)
Q Exactive Plus (1)
Liquid Chromatography MS - Negative - HILIC (1)
Liquid Chromatography MS - Positive - HILIC (1)
Xevo TQ MS (Waters) (1)
Liquid Chromatography MS - alternating – hilic (1)
Capillary electrophoresis MS - negative (1)

Publication Date

2021 (62)
2011 (53)
2024 (52)
2025 (49)
2022 (49)
2014 (42)
2023 (41)
2020 (40)
2012 (27)
2016 (24)
2026 (24)
2013 (23)
2015 (21)
2019 (20)
2010 (18)
2017 (15)
2009 (8)
2008 (8)
2018 (6)
2007 (1)
2006 (1)

UNIPROT ID/AC

1433B_SOYBN (2)
1433D_SOYBN (2)
6DCS_SOYBN (2)
A1YZE0_SOYBN (2)
A5I866_SOYBN (2)
A5JUQ4_SOYBN (2)
A5JVZ7_SOYBN (2)
A5Z2K3_SOYBN (2)
A7BIC9_SOYBN (2)
A7X657_SOYBN (2)
A7XZJ7_SOYBN (2)
A9CPA7_SOYBN (2)
A9QNE4_SOYBN (2)
ACCD_SOYBN (2)
ACT3_SOYBN (2)
AKR1_SOYBN (2)
AMYB_SOYBN (2)
AOX3_SOYBN (2)
ATPB_SOYBN (2)
ATPE_SOYBN (2)
ATPF_SOYBN (2)
B0M195_SOYBN (2)
B0M196_SOYBN (2)
B0M1A0_SOYBN (2)
B0M1A4_SOYBN (2)
B0M1A6_SOYBN (2)
B0M1A9_SOYBN (2)
B0M1B1_SOYBN (2)
B1ACD3_SOYBN (2)
B1ACD5_SOYBN (2)

ENSEMBL ID

ENSG00000170477 (5)
ENSG00000247315 (5)
ENSG00000147251 (4)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17368 (14)
CHEBI:17895 (12)
CHEBI:16335 (11)
CHEBI:16359 (11)
CHEBI:17295 (11)
CHEBI:30769 (11)
CHEBI:16755 (10)
CHEBI:28875 (10)
CHEBI:17568 (10)
CHEBI:15891 (10)
CHEBI:16704 (10)
CHEBI:16737 (10)
CHEBI:28865 (10)
CHEBI:15756 (10)
CHEBI:16828 (10)
CHEBI:17562 (9)
CHEBI:17748 (9)
CHEBI:28842 (9)
CHEBI:17203 (9)
CHEBI:28834 (9)
CHEBI:16015 (9)
CHEBI:9410 (9)
CHEBI:28716 (9)
CHEBI:17351 (9)
CHEBI:18089 (9)
CHEBI:17687 (9)
CHEBI:9907 (8)
CHEBI:9300 (8)
CHEBI:16708 (8)
CHEBI:15741 (8)

Metabolite Name

Hypoxanthine (11)
L-Tyrosine (10)
L-Proline (8)
L-Histidine (8)
Taurine (8)
Adenosine (8)
Thymidine (8)
Uracil (7)
L-Arginine (7)
Citric acid (7)
Suberic acid (7)
L-Glutamine (7)
Xanthine (7)
Guanosine (7)
Uridine (7)
Creatinine (7)
L-Phenylalanine (7)
L-Alanine (6)
Benzoic acid (6)
Succinic acid (6)
Cholic acid (6)
Guanine (6)
L-Glutamate (6)
Dodecanoic acid (6)
Dodecanedioic acid (6)
Myristic acid (6)
Cytidine (6)
Creatine (6)
Indoleacetic acid (5)
Thiamine (5)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (88)
ChIP-seq (44)
RNA-seq of coding RNA (38)
RNA-seq of non coding RNA (14)
Methylation profiling by high throughput sequencing (8)
Comparative genomic hybridization by array (5)
Genotyping by array (4)
Transcription profiling by RT-PCR (3)
Methylation profiling by array (3)
Unknown experiment type (2)
Other (2)
MicroRNA profiling by array (1)

Release Date

2025 (868)
2022 (744)
2024 (700)
2023 (680)
2021 (520)
2020 (363)
2019 (297)
2018 (234)
2017 (188)
2016 (163)
2026 (142)
2015 (119)
2014 (110)
2013 (78)
2011 (77)
2012 (66)
2010 (31)
2008 (16)
2009 (15)
2006 (7)
2007 (5)
2005 (3)
2004 (2)

Lab affiliation

National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (4)
University of Alabama at Birmingham, O'Neal Mass Spectrometry Proteomics Shared Facility (4)
Shandong Normal University (3)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (2)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Harbin 150040, China (2)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China (2)
Department of Stomatology, Nanfang Hospital, Southern Medical University, Guangzhou, China, 510515 (2)
Huazhong Agricultural University (2)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)
School of Engineering, Westlake University (2)
Sichuan university (2)
Zhejiang University (2)
2 College of Horticulture, South China Agricultural University, Guangzhou 510642, China (1)
BGI-Shenzhen,China (1)
BGI-shenzhen (1)
Beijing Friendship Hospital, Capital Medical University (1)
Beijing proteome research center, Beijing, China (1)
CRUK Beatson Institute (1)
Cancer Research Institute, School of Basic Medical Science, Central South University (1)
Cancer Research Institute, Xiangya Basic Medical College, Central South University, No. 110 Xiangya Road, Kaifu District, Changsha City, Hunan Province (1)
Cancer Science Institute of Singapore (CSI), National University of Singapore (NUS) (1)
Center for Tuberculosis Control of Guangdong Province (1)
Center for Tuberculosis Control of Guangdong Province, Guangzhou, 510630, China (1)
College of Animal Science and Veterinary Medicine, Shenyang Agricultural University (1)
Daping Hospital of AMU (1)
Department of Applied Chemistry, Chaoyang University of Technology, 168 Jifong East Road, Wufong, Taichung 41349, Taiwan (1)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China. (1)
Department of Cell Biology, School of Basic Medical Sciences, Southern Medical University, Guangzhou, Guangdong 510515, China (1)
Department of Chemistry, Michigan State University (1)

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Abnormal cerebral metabolism and metabolic connectivity in individuals with heroin dependence: an integrated resting-state PET/fMRI study in large-scale networks.

Not available

S-EPMC10355996 | biostudies-literature

Expression data from silkworm posterior silk glands at the late larval stages

The silkworm silk gland is one of the most efficient protein synthesis systems among all organisms. Its amazingly efficient protein synthesis makes the silk gland a desirable object for basic studies on gene expression and regulation and for biotechnological applications. At the early stages of the ...

ORGANISM(S): Bombyx mori

2012-12-05 | E-GEOD-26172 | biostudies-arrayexpress

Effects of interactions between environmental factors and KIF1B genetic variants on the risk of hepatocellular carcinoma in a Chinese cohort.

Not available

S-EPMC4837435 | biostudies-literature

Mechanistic evaluation of Jiu Wei Qing Zhi Gao in non-alcoholic fatty liver disease: insights from network Pharmacology and experimental validation.

Not available

S-EPMC11992867 | biostudies-literature

A High-Fat, High-Cholesterol Diet Promotes Intestinal Inflammation by Exacerbating Gut Microbiome Dysbiosis and Bile Acid Disorders in Cholecystectomy.

Not available

S-EPMC10489946 | biostudies-literature

Multi-omic studies analysis reveals distinct photosynthetic responses to light stress in photosynthesis and primary metabolism to high light stress between the C4 crop maize and the C3 crop rice

To systematically dissect how HL differentially affects growth of maize and rice, we carried out time-resolved course dependent multi-omics analysstudies, includanalyzing the responses in the transcriptome, the translatome, the proteome and the metabolome withto HL- treatmented in maize and rice.

ORGANISM(S): Zea mays (Maize) Oryza sativa (Rice)

2025-11-03 | PXD049035 | Pride

Metformin use and associated risk of total joint replacement in patients with type 2 diabetes: a population-based matched cohort study.

Not available

S-EPMC9829054 | biostudies-literature

Experimental infection of Z:ZCLA Mongolian gerbils with human hepatitis E virus.

Not available

S-EPMC4299338 | biostudies-literature

Interleukin-18 genetic polymorphisms contribute differentially to the susceptibility to Crohn's disease.

Not available

S-EPMC4515852 | biostudies-literature

MAGP-1 protects liver fibrosis in experimental mouse models

Matrisome members in liver ECM scaffolds from Mfap2-/- mice and their littermates were identified and quantafied using liver decellularization, followed by Label-free liquid chromatography tandem mass spectrum.

ORGANISM(S): Mus musculus (Mouse)

2025-05-07 | PXD053782 | Pride

Ecm Matrisome Magp-1 Liver fibrosis Decellularization

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5830 Results

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