Chen Yanxia Y - OmicsDI

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Unknown (5)
Proteomics (4)
Metabolomics (2)
Transcriptomics (1)

Organisms

Schizophyllum commune H4-8 (3)
Mycobacterium tuberculosis SP7 (3)
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 (3)
Oryza sativa Japonica Group (3)
Rabbit calicivirus (3)
Crotalus durissus terrificus (3)
Eriocheir sinensis (3)
Candidatus Endoriftia persephonae (3)
Mycobacterium tuberculosis SP10 (3)
Mycobacterium tuberculosis SP13 (3)
Cotesia typhae (3)
Mycobacterium tuberculosis SP22 (3)
Cepaea nemoralis (3)
Enterobacter ludwigii (3)
Trichoderma asperellum CBS 433.97 (3)
Corynebacterium diphtheriae bv. mitis str. ISS 3319 (3)
Nakaseomyces glabratus (3)
Olea europaea (3)
Chlamydomonas reinhardtii (3)
Lama (3)
Planorbella pilsbryi (3)
Wolbachia sp. wMelPop (3)
Pyricularia oryzae P131 (3)
Enterococcus mundtii CRL35 (3)
Pongo pygmaeus (3)
Gryllodes sigillatus (3)
Oncorhynchus tshawytscha (3)
Pseudomonas canadensis (3)
Trichinella spiralis (1)
Homo sapiens (1)

Repository

pride (3)
MetaboLights (2)
biostudies-arrayexpress (1)
iProX (1)

Tissue

Cartilage (1)
Permanent cell line cell (1)
Cell culture (1)

Disease

Wounds and Injuries (1)

Technology Type

SWATH MS (3)
Mass Spectrometry (3)
Mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2024 (3)
2013 (1)
2025 (1)
2023 (1)
2022 (1)

CHEBI ID

CHEBI:80247 (1)
CHEBI:28827 (1)
CHEBI:183815 (1)
CHEBI:170038 (1)
CHEBI:86497 (1)
CHEBI:183380 (1)
CHEBI:183244 (1)
CHEBI:170035 (1)
CHEBI:183316 (1)
CHEBI:183710 (1)
CHEBI:65858 (1)
CHEBI:183448 (1)
CHEBI:43362 (1)
CHEBI:142218 (1)
CHEBI:178475 (1)
CHEBI:192655 (1)
CHEBI:192613 (1)
CHEBI:192588 (1)
CHEBI:183399 (1)
CHEBI:91286 (1)
CHEBI:145120 (1)
CHEBI:183780 (1)
CHEBI:64243 (1)
CHEBI:183461 (1)
CHEBI:6919 (1)
CHEBI:173349 (1)
CHEBI:183368 (1)
CHEBI:44602 (1)
CHEBI:143353 (1)
CHEBI:167822 (1)

Metabolite Name

N1-[2-(2-pyridyl)ethyl]-2-aminobenzamide (1)
8(9)-EET Ethanolamide (1)
1-hydroxy-1-(4-methoxyphenyl)propan-2-yl 4-methoxybenzoate (1)
¦Á-Hydroxymidazolam (1)
Ethyl 5-hydroxy-4-oxo-4H-chromene-2-carboxylate (1)
-Aspartylphenylalanine (1)
Delta-Tocopherol (1)
Acetyl phosphate (1)
Sparteine (1)
3-amino-2,6-diphenyl-4,7-dihydro-2H-pyrazolo[3,4-d]pyrimidin-4-one (1)
Uracil 1-beta-D-arabinofuranoside (1)
5-hydroxy-2-phenyl-4H-chromen-4-one (1)
7-methylpyrimido[4,5-d]pyrimidin-4-amine (1)
2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-6-methyl-4H-chromen-4-one (1)
Cis-Resveratrol (1)
3-methoxy-2-phenyl-4H-furo[2,3-h]chromen-4-one (1)
IMH (1)
N1-[2-oxo-6-(1H-pyrrol-1-yl)-2H-chromen-3-yl]acetamide (1)
4-methoxy-9-(2-methylbut-3-en-2-yl)-7H-furo[3,2-g]chromen-7-one (1)
3-ethyl-4-hydroxy-1-methyl-1,2-dihydroquinolin-2-one (1)
6,6-dimethyl-4-piperidino-5,6-dihydro-2H-thiine-2-thione (1)
6-methyl-4-(morpholinomethyl)-2H-chromen-2-one (1)
6-methyl-7-nitro-2,3-dihydro-1,4-benzodioxine (1)
N1-(3-pyridyl)-2,3,4,5,6-pentamethylbenzene-1-sulfonamide (1)
(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-phenoxyoxane-3,4,5-triol (1)
Clinafloxacin (1)
2-(3,5-dimethyl-1H-pyrazol-4-yl)-5-methoxybenzoic acid (1)
N6-Me-Adenosine (1)
Ala-trp (1)
2-{[methyl(2,3,4,5,6-pentahydroxyhexyl)amino]methylidene}malononitrile (1)

Study type

RNA-seq of coding RNA (1)

Release Date

2018 (2)
2013 (1)
2025 (1)
2023 (1)
2022 (1)

Lab affiliation

Hubei Normal University (2)
College of Ecology-Environment Engineering, Qinghai University (1)

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Integrated omics analysis reveals the alteration of gut microbiota and fecal metabolites in Cervus elaphus kansuensis

The gut microbiota is the largest and most complex microecosystem in animals. It is influenced by the host's dietary habits and living environment, and its composition and diversity play irreplaceable roles in animal nutrient metabolism, immunity, and adaptation to the environment. Although the gut ...

2024-08-08 | MTBLS6121 | MetaboLights

Integrative analyses of antler cartilage transcriptome and pro-teome of Gansu red deer (Cervus elaphus kansuensis) at different growth stages

The velvet antler is a unique model for cancer and regeneration research due to its periodic re-generation and rapid growth. Antler growth is mainly triggered by the growth center located in its tip, which consists of velvet skin, mesenchyme and cartilage. Among them, cartilage accounts for most of ...

ORGANISM(S): Cervus elaphus kansuensis

2022-05-20 | PXD032668 | Pride

The lipid-metabolism enzyme ECI2 reduces neutrophil extracellular traps formation for colorectal cancer suppression

Abnormalities in ether lipid metabolism as well as the formation of neutrophil extracellular traps have recently been recognized as detrimental factors affecting tumorigenesis and progression. However, the role of abnormal ether lipid metabolism in colorectal cancer (CRC) evolution has not been repo...

2024-10-01 | MTBLS10323 | MetaboLights

Proteomics analysis of differentially expressed proteins in lung cancer H157 cells after overexpression of AACT with data‐independent acquisition mass spectrometry

H157 cells transfected with vector and overexpressed AACT plasmids were treated and used for MS detection. The MS data were acquired using an Orbitrap Exploris 480 Mass Spectrometer coupled with an EASY-NLC 1200 liquid phase LC-MS system. DIA raw data files were analyzed by DIA-NN software. The diff...

ORGANISM(S): Homo sapiens (Human)

2023-07-18 | PXD036119 | Pride

Aact Proteomics Overexpression Dia Lung cancer

Identification of differentially expressed proteins in lung cancer H157 cells after nanocomposite AANL-SeNPs treatment with DIA-MS detection

H157 cells were treated with nanocomposite AANL-SeNPs and harvested for mass spectrometry detection. The mass spectrum data were obtained by timsTOF Pro combined with UltiMate 3000 RSLCnano liquid chromatograph system. DIA-NN software is used to analyze DIA original data files. The differentially ex...

ORGANISM(S): Homo sapiens (Human)

2024-05-22 | PXD044000 | Pride

Lung cancer Proteomics Dia-ms Aanl-senps H157

Efficacy and safety of carbon ion radiotherapy for chordomas: a systematic review and meta-analysis.

Not available

S-EPMC10500892 | biostudies-literature

Global gene expression analysis of the zoonotic parasite Trichinella spiralis revealed novel genes in host parasite interaction

Trichinellosis of human and other mammals was caused through the ingestion of the parasiteM-oM-

ORGANISM(S): Trichinella spiralis

2013-06-18 | E-GEOD-39151 | biostudies-arrayexpress

Transcriptome analysis of Valsa mali reveals its response mechanism to the biocontrol actinomycete Saccharothrix yanglingensis Hhs.015.

Not available