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ProteomicsComparative circadian proteomes in mouse liver under normal versus ECD conditions
Exam change in the whole-cell and nuclear proteome circadian proteome in response to environmental circadian disruption (ECD) in mouse liver
ORGANISM(S): Mus musculus (Mouse) 
2024-06-12 | PXD052085 | Pride
Circadian rhythms Liver Proteome 
UnknownEnvironmental circadian disruption re-writes liver circadian proteomes.
Not available
S-EPMC11220080 | biostudies-literature
ProteomicsA proteomics landscape of circadian clock in mouse liver
As a circadian organ, liver executes diverse functions in different phase of the circadian clock. This process is believed to be driven by a transcription program. Here, we present a TF DNA-binding activity centered multi-dimensional proteomics landscape, including DNA-binding activity of TFs, the p...
ORGANISM(S): Mus Musculus 
PXD008771 |
ProteomicsSupplement data of project: A proteomics landscape of circadian clock in mouse liver
As a circadian organ, liver executes diverse functions in different phase of the circadian clock. This process is believed to be driven by a transcription program. Here, we present a TF DNA-binding activity centered multi-dimensional proteomics landscape, including DNA-binding activity of TFs, the p...
ORGANISM(S): Mus Musculus 
PXD008862 |
ProteomicsCircadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver.
Diurnal oscillations of gene expression controlled by the circadian clock underlie rhythmic physiology across most living organisms. Although such rhythms have been extensively studied at the level of transcription and mRNA accumulation, little is known about the accumulation patterns of proteins. H...
ORGANISM(S): Mus musculus (Mouse) 
2014-08-08 | PXD001211 | Pride
Lc-msms Mouse Liver proteins Silac Circadian rhythms Quantitative proteomics 
ProteomicsProteomic and phosphoproteomic landscape reveals the functional contributions of circadian gene Bmal1 in rat nucleus pulposus cells
Intervertebral disc degeneration (IDD) is a major cause of low back pain (LBP), and the pathogenesis remains unknown. Recently, an autoregulating circadian rhythm was identified in intervertebral discs (IVDs), the abolition of which led to IDD. The genetic disruption of the mouse IVD molecular clock,...
ORGANISM(S): Rattus Norvegicus 
2021-10-21 | PXD029273 |
UnknownCircadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver.
Not available
S-EPMC3890886 | biostudies-literature
UnknownCircadian rhythm disruptions associated with opioid use disorder in synaptic proteomes of human dorsolateral prefrontal cortex and nucleus accumbens.
Not available
S-EPMC10914630 | biostudies-literature
OtherLabel-free quantitative analysis of the casein kinase 2-responsive phosphoproteome of the marine minimal model species Ostreococcus tauri.
Data from ProteomeXchange, PXD ID: PXD000975. File: F010311.mgf. Published as part of Proteomics. 2015 Apr 29 . From the Abstract: {{i}} Casein kinase 2 (CK2) is a protein kinase that phosphorylates a plethora of cellular target proteins involved in processes including DNA repair, cell cycle contro...
ORGANISM(S): Ostreococcus_tauri 
GPM32320017651 | GPMDB
Resource Reanalysis 
ProteomicsHippocampal circadian proteomes of young and middle-aged mice
Hippocampal tissues from young and middle-aged C57BL/6J mice were harvested at 4-hour intervals over two days and processed for proteomic analysis using label-free quantification.
ORGANISM(S): Mus musculus (Mouse) 
2020-05-26 | PXD013364 | Pride
Circadian Hippocampus Proteomics Mouse Lc-ms/ms 
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