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MetabolomicsPathogen-induced phenolic acids biosynthesis is associated with deleterious microbiome changes during Plasmodiophora brassicae-induced clubroot in Pakchoi

Plant diseases have an important impact on the agricultural economy, often causing a decrease in crop yield and quality (Huang et al., 2020). Cruciferous plants can be used as both crops and vegetables, and have important application value. For example edible and oil sources, anima...

2025-03-31 | MTBLS10976 | MetaboLights
MetabolomicsSilicon ameliorates clubroot responses in canola (Brassica napus): A “multi-omics”-based investigation into possible mechanisms
Not available
ORGANISM(S): Brassica napus 
ST002406 | MetabolomicsWorkbench
TranscriptomicsThe role of cytokinins in clubroot disease
Clubroot (Plasmodiophora brassicae) is a pathogen of Brassicaceae that causes significant reductions in yield as a consequence of gall formation in the root and hypocotyl of infected plants. The pathogen hijacks host vascular cambium development and cytokinins are implicated in this process. RNASeq ...
ORGANISM(S): Arabidopsis thaliana 
2016-07-04 | E-MTAB-4176 | biostudies-arrayexpress
MetabolomicsEarly-stage responses to Plasmodiophora brassicae at the metabolome levels in clubroot resistant and susceptible oilseed Brassica napus
Not available
ORGANISM(S): Brassica napus 
ST002330 | MetabolomicsWorkbench
ProteomicsProteomics analysis integrated with transcriptomics of clubroot resistant and susceptible Brassica napus near-isogenic lines in response to Plasmodiophora brassicae infection
Clubroot disease, caused by Plasmodiophora brassicae, poses a significant global threat to Brassica crop production. Understanding the disease resistance mechanism is vital to assist in the continuous development of clubroot-resistant genetic material. In this study, we used clubroot-resistant (CR) ...
ORGANISM(S): Brassica napus (Rape) 
2025-10-06 | PXD060262 | Pride
Proteomics Brassica napus Clubroot 
TranscriptomicsThe role of cytokinins in clubroot disease
Clubroot (Plasmodiophora brassicae) is a pathogen of Brassicaceae that causes significant reductions in yield as a consequence of gall formation in the root and hypocotyl of infected plants. The pathogen hijacks host vascular cambium development and cytokinins are implicated in this process. Microar...
ORGANISM(S): Arabidopsis thaliana 
2016-01-12 | E-MTAB-4201 | biostudies-arrayexpress
ProteomicsA proteome level study in the early stages of clubroot infection in Brassica napus canola.
Clubroot is a destructive root disease in Brassica species caused by a protist pathogen, Plasmodiophora brassicae. There is limited omics information available in response to the pathogen, especially in the early stages of pathogenesis. The goal of this study is to identify proteins (therefore genes...
ORGANISM(S): Brassica napus (Rape) 
2024-02-01 | PXD038670 | Pride
Boxcardia Clubroot Brassica napus 
GenomicsThe role of cytokinins in clubroot disease
The role of cytokinins in clubroot disease
PRJEB12261 | ENA
GenomicsRNAseq Brassica napus seed drought clubroot
RNA sequencing data for responses to drought stress and/or clubroot pathogen infection in developing seeds of Brassica napus
PRJEB45343 | ENA
TranscriptomicsTranscriptome analysis of Brassica rapa near-isogenic lines carrying clubroot-resistant and -susceptible alleles in response to Plasmodiophora brassicae during early infection
Although Plasmodiophora brassicae is one of the most common pathogens worldwide, the causal agent of clubroot disease in Brassica crops, resistance mechanisms to it are still only poorly understood. To study the early defense response induced by P. brassicae infection, a global transcriptome profili...
ORGANISM(S): Brassica rapa 
2016-02-01 | GSE74044 | GEO
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