Collagen-derived peptide

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Unknown (270)
Proteomics (74)
Transcriptomics (73)
Genomics (21)
Metabolomics (2)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (65)
Alteromonadales (65)
Apostichopus japonicus (65)
Canis lupus familiaris (65)
Carya cathayensis (65)
Clostridioides difficile 630 (65)
Cyanophora paradoxa (65)
Ensifer adhaerens (65)
Enterococcus faecalis (65)
Globicatella sanguinis (65)
Halictus scabiosae (65)
Histomonas meleagridis (65)
Homo sapiens (40)
Mus musculus (36)
Rattus norvegicus (7)
Bos taurus (2)
Xenopus laevis (1)
Canis lupus familiaris (1)
Saccharomyces cerevisiae (1)
Acipenser sturio (1)
Alligator mississippiensis (1)
Caiman crocodilus fuscus (1)
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Cervidae (1)
Crocodylus siamensis (1)
Equus caballus (1)
Oryctolagus cuniculus (1)
Ovis aries (1)
Sus scrofa (1)
Varanus salvator (1)

Organisms

Mus musculus (5)
Homo sapiens (4)

Repository

biostudies-arrayexpress (76)
pride (65)
ENA (14)
geo (7)
MassIVE (3)
iProX (2)
jPOST (2)
MetaboLights (2)
EGA (1)

Tissue

Fibroblast (9)
Cell culture (8)
Breast (4)
Heart (4)
Bone (3)
Primary cell (3)
Blood cell (2)
Blood plasma (2)
Blood platelet (2)
Ear (2)
Hepatocyte (2)
Liver (2)
Permanent cell line cell (2)
Platelet (2)
Skin (2)
Stem cell (2)
Urine (2)
Blood (1)
Blood serum (1)
Brain (1)
Breast cancer cell (1)
Carotid artery (1)
Cell suspension culture (1)
Dendritic cell (1)
Dental pulp cell (1)
Embryonic fibroblast (1)
Epithelial cell (1)
Extracellular matrix (1)
Intestine (1)
Lung (1)

Disease

Breast cancer (3)
Neck carcinoma (3)
Cardiovascular system disease (2)
Disease free (2)
Immunoglobulin light chain amyloidosis (2)
Prostate adenocarcinoma (2)
Multiple myeloma (1)
Atherosclerosis (1)
Brain glioblastoma multiforme (1)
COVID-19 (1)
Chronic kidney disease (1)
Connective tissue disease (1)
Duchenne muscular dystrophy (1)
Fatty liver disease (1)
Liver cancer (1)
Lyme disease (1)
Malignant neoplasm of ovary (1)
Neuroblastoma (1)
Periodontitis (1)
Placenta disease (1)
Rheumatoid arthritis (1)
Tuberculosis (1)
Ureteral obstruction (1)
Uveitis (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (65)
Shotgun proteomics (40)
Bottom-up proteomics (13)
Data-dependent acquisition (7)
Data-independent acquisition (3)
Gel-based experiment (3)
Mass spectrometry (2)
Top-down proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
HDMSE (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (4)
Illumina HiSeq 2500 (2)
Illumina HiSeq 4000 (2)
Q Exactive Plus (2)
3' v3.1 10X (1)
Chromium X (1)
NextSeq 500 (1)
Q Exactive (1)
TimsTOF Pro (1)
Flow injection analysis MS - positive (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2025 (16)
2012 (13)
2010 (11)
2026 (11)
2022 (10)
2021 (10)
2023 (8)
2019 (8)
2024 (8)
2020 (7)
2015 (7)
2018 (6)
2014 (6)
2013 (6)
2011 (6)
2009 (6)
2008 (6)
2016 (5)
2017 (3)
2007 (2)
2006 (1)

CHEBI ID

CHEBI:64561 (2)
CHEBI:72737 (2)
CHEBI:64563 (2)
CHEBI:177116 (1)
CHEBI:47495 (1)
CHEBI:177119 (1)
CHEBI:168018 (1)
CHEBI:177115 (1)
CHEBI:72727 (1)
CHEBI:10352 (1)
CHEBI:177123 (1)
CHEBI:177108 (1)
CHEBI:177106 (1)
CHEBI:177096 (1)
CHEBI:156165 (1)
CHEBI:175522 (1)
CHEBI:177107 (1)
CHEBI:131667 (1)
CHEBI:165771 (1)
CHEBI:177105 (1)
CHEBI:177095 (1)
CHEBI:177094 (1)
CHEBI:35812 (1)
CHEBI:8927 (1)
CHEBI:94521 (1)
CHEBI:166646 (1)
CHEBI:177110 (1)
CHEBI:177112 (1)
CHEBI:177092 (1)
CHEBI:177118 (1)

Metabolite Name

[2-(5,7-dihydroxy-4-oxo-2-phenyl-3,4-dihydro-2H-1-benzopyran-8-yl)-3,5-dihydroxy-6-(hydroxymethyl)oxan-4-yl]oxidanesulfonic acid (1)
H-89 (1)
PHENYL-gamma-Aminobutyric Acid (1)
DIHYDROROTENONE (1)
3-carboxy-4-methyl-5-(4-hydroxypentyl)-2-furanpropanoic acid (1)
9-PAHSA (1)
1-(s-glutathionyl)-2,4-dinitrobenzene (1)
Myristic Acid ethyl ester (1)
Clopamide (1)
Palmitoleic Acid ethyl ester (1)
13-HpODE (1)
Stearic Acid ethyl ester (1)
Phytomonic Acid (1)
2-(Methylthio)ethanol (1)
Cyanidin 3-(2G-xylosylrutinoside) (1)
4-hydroxy Nonenal Glutathione (1)
4-hydroxy-butyric acid (1)
7Z, 10Z, 13Z, 16Z, 19Z-docosapentaenoic acid (1)
9-HpODE (1)
Glutamylmethionine (1)
Ethylene glycol distearate (1)
SM C26:1 (1)
SM C26:0 (1)
SM C24:1 (1)
SM C24:0 (1)
SM C22:3 (1)
SM C20:2 (1)
SM C18:1 (1)
SM C18:0 (1)
SM C16:0 (1)

First Public Date

2024 (4)
2023 (4)
2026 (2)
2025 (1)
2019 (1)
2018 (1)
2017 (1)

Study type

Transcription profiling by array (49)
RNA-seq of coding RNA (8)
ChIP-seq (5)
Methylation profiling by array (3)
Proteomic profiling by array (2)
Unknown experiment type (1)
Animal - One-color microarray (1)
ChIP-chip by tiling array (1)
Comparative genomic hybridization by array (1)
Single nucleus RNA sequencing (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (36)
2023 (27)
2024 (27)
2022 (22)
2021 (22)
2015 (21)
2019 (19)
2018 (19)
2012 (19)
2020 (17)
2017 (17)
2016 (17)
2010 (14)
2014 (13)
2011 (11)
2008 (11)
2013 (10)
2009 (8)
2026 (5)
2007 (4)
2005 (2)
2006 (1)
2004 (1)
2002 (1)
1999 (1)
1998 (1)

Lab affiliation

Department of Physiology and Biophysics, University of Illinois at Chicago (3)
Cell matrix biology and regenerative medicine, School of biological sciences, University of manchester (2)
Fondazione IRCCS Policlinico San Matteo (2)
Washington State University (2)
Analytical Chemistry Lab Fondazione Istituto Italiano di Tecnologia Via Morego 30, 16163 Genova Italy (1)
BioArCh, University of York, UK (1)
BioArCh, University of York, United Kingdom (1)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
Cell matrix biology and regenerative medicine, School of Biological Sciences, University of Manchester (1)
Cellular and Molecular Immunology Research Unit (CMIRU), Faculty of Allied Health Sciences, Naresuan University, Phitsanulok, 65000, Thailand (1)
Center for Biomedical Mass Spectrometry, Department of Biochemistry, Boston University School of Medicine (1)
Centre for Drug Safety Science, Dept Pharmacology and Therapeutics, Institute for Systems, Molecular and Integrative Biology, University of Liverpool (1)
Centre for Drug Safety Science, Dept Pharmacology and Therapeutics, Institute of Systems, Molecular and Integrative Biology, University of Liverpool (1)
Clinical Proteomics (1)
Department of Biochemistry University of Turku Turku, FINLAND (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, USA (1)
Department of Biochemistry, Albert Einstein College of Medicine, The Bronx, NY 10461, United States (1)
Department of Biochemistry, University of Turku, Turku, Finland (1)
Department of Human Structure and Repair, Laboratory of Experimental Cancer Research, Ghent University, Belgium3. Cancer Research Institute Ghent (CRIG), Ghent University, Belgium (1)
Department of Musculoskeletal Biology Institute of Ageing and Chronic Disease University of Liverpool (1)
Department of Pathology The University of Michigan 1150 W Medical Center Dr Ann Arbor, MI 48109, USA (1)
Department of Pharmacology, College of Basic Medical Sciences, Jilin University, Changchun, 130000, China (1)
Department of Plasma Proteins, Sanquin Research, Amsterdam, The Netherlands (1)
Dept of Pharmacology and Immunology Medical University of South Carolina Charleston, SC, USA (1)
Discovery Proteomics Facility, Oxford (1)
Division of Cell Matrix Biology & Regenerative Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester, UK (1)
Faculty of Human and Medical Science (1)
Fondazione Ri.MED (1)
Fondazione Ri.Med Department of Laboratory Medicine and Advanced Biotechnologies, Istituto Mediterraneo per i Trapianti e Terapie ad Alta Specializzazione (IRCCS - ISMETT) Via Ernesto Tricomi, 5 - 90127 Palermo (1)
Head of the Curie Institute Mass Spectrometry platform (LSMP) (1)

Tags

xref:PubMed:38536934 (2)
xref:PubMed:41943978 (1)
xref:PubMed:28091360 (1)
xref:PubMed:37972658 (1)
xref:PubMed:38027063 (1)

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HUVEC cell extracts for the investigation of collagen-induced cell signalling

We demonstrated that an abundant Collagen type I alpha 1-derived peptide inhibited collagen type I-induced endothelial cell migration in Human Umbilical Vein Endothelial Cells. We then applied mass spectrometry based proteomics to investigate the potential signalling pathways induced by collagen typ...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2025-03-12 | MSV000097296 | MassIVE

Proteomic analysis of collagen membrane and matrix

High-resolution shotgun proteomic analysis on two porcine collagen-based biomaterials designed for guided bone regeneration and soft tissue augmentation was perfomed. A porcine-derived collagen membrane and a collagen matrix derived from peritoneum and/or skin were digested, separated by nano-revers...

ORGANISM(S): Sus scrofa domesticus (domestic pig)

2021-09-09 | PXD019298 | Pride

Synergy between a collagen IV mimetic peptide and a somatotropin-domain derived peptide as angiogenesis and lymphangiogenesis inhibitors.

Not available

S-EPMC3867130 | biostudies-literature

Competitive interactions of collagen and a jararhagin-derived disintegrin peptide with the integrin alpha2-I domain.

Not available

S-EPMC2423259 | biostudies-literature

Supra-molecular assembly of a lumican-derived peptide amphiphile enhances its collagen-stimulating activity.

Not available

S-EPMC4743677 | biostudies-literature

A biomimetic collagen derived peptide exhibits anti-angiogenic activity in triple negative breast cancer.

Not available

S-EPMC4226498 | biostudies-literature

Endotrophin, a Collagen VI Formation-Derived Peptide, in Heart Failure.

Not available

S-EPMC10465122 | biostudies-literature

Collagen-derived prolyl-hydroxyproline dipeptide promotes cellular homeostasis and lamellipodia-driven cell motility through active β1-integrin in adult tendon cells

Collagen-derived hydroxyproline-containing peptides show a variety of biological properties in cells. However, no comprehensive study has yet explored the functional links between Hyp-containing peptides and cellular behavior. Here, we show that the dipeptide prolyl-hydroxyproline (Pro–Hyp) exhibits...

ORGANISM(S): Mus musculus (Mouse)

2022-09-28 | PXD020374 | Pride

Collagen-derived peptide proline-hydroxyproline adult tendon cells extracellular matrix scleraxis cell motility extracellular signal-regulated kinase

A collagen IV-derived peptide disrupts α5β1 integrin and potentiates Ang2/Tie2 signaling.

Not available

S-EPMC6478425 | biostudies-literature

Prediction, screening and characterisation of novel bioactive, tetra-peptide matrikines 3

Small peptides with amino acid sequences similar to native skin proteins can beneficially affect clinical appearance (wrinkles) and architecture (collagen and elastic fibre deposition and epidermal thickness). However, the discovery of new cosmetic peptides has not been underpinned by any guiding hy...

ORGANISM(S): Homo sapiens

2023-11-15 | E-MTAB-12704 | biostudies-arrayexpress

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442 Results

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Organisms

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