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Proteomicscompartmentalized protein expression in rat hippocampal neurons undergoing homeostatic plasticity
Synaptic scaling is a form of homeostatic plasticity which allows neurons to adjust their action potential firing rate in response to chronic alterations in neural activity. Synaptic scaling requires profound changes in gene expression, but the relative contribution of local and cell-wide mechanisms...
ORGANISM(S): Rattus norvegicus (Rat) 
2021-07-09 | PXD020745 | Pride
Neurons Stimulation Homeostatic plasticity Hippocampus Rat Cellculture Ptx Dendrites 
UnknownSubcellular fractionation enhances proteome coverage of pancreatic duct cells.
Not available
S-EPMC3618666 | biostudies-literature
UnknownProteome analysis of human nuclear insoluble fractions.
Not available
S-EPMC4158948 | biostudies-literature
ModelsQuek2008 - Genome-scale metabolic network of Mus musculus
Quek2008 - Genome-scale metabolic network of Mus musculus This model is described in the article: On the reconstruction of the Mus musculus genome-scale metabolic network model. Quek LE, Nielsen LK. Genome Inform 2008; 21: 89-100 Abstract: Genome-scale metabolic modelin...
2015-07-30 | MODEL1507180067 | BioModels
Transcriptomics3' mRNA-seq of neurites and soma isolated from mESC-derived neurons
3' mRNA-seq was performed with QuantSeq 3' mRNA-Seq kit (Lexogen 015) according to the manufacturer’s recommendations. 3' mRNA-seq was done in biological triplicates (soma) or duplicates (neurites), using 260 ng of total RNA from neurites or soma of mESC-derived neurons per sample. Libraries were po...
ORGANISM(S): Mus musculus 
2019-01-12 | E-MTAB-7251 | biostudies-arrayexpress
ProteomicsPhosphorylation of the compartmentalized PKA substrate TAF15 regulates RNA-Protein interactions
Spatiotemporal-controlled second messengers alter molecular interactions of central signaling nodes for ensuring physiological signal transmission. One prototypical second messenger molecule which modulates kinase signal transmission is the cyclic-adenosine monophosphate (cAMP). The main proteinogen...
ORGANISM(S): Homo sapiens (Human) 
2024-04-04 | PXD048869 | Pride
Camp Taf15 Pka Phosphorylation Rna 
UnknownOrigin of the nuclear proteome on the basis of pre-existing nuclear localization signals in prokaryotic proteins.
Not available
S-EPMC7189692 | biostudies-literature
UnknownProteomic analysis reveals the diversity and complexity of membrane proteins in chickpea (Cicer arietinum L.).
Not available
S-EPMC3558352 | biostudies-literature
UnknownApoplast proteome reveals that extracellular matrix contributes to multistress response in poplar.
Not available
S-EPMC3091788 | biostudies-literature
ProteomicsCompartmentalized proteomic profiling outlines the crucial role of the Classical secretory pathway during recombinant protein production in Chinese hamster ovary cells
Chinese hamster ovary (CHO) cells have been widely employed for production of recombinant proteins (RP) for research and therapeutic purposes. Indeed, this expression system was used for production of most of approved antibodies (84%) in 2015-2018 period. The success of this cell line for RP product...
ORGANISM(S): Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus) 
2021-05-04 | PXD021014 | Pride
Classical secretory pathway Subcellular fractionation Chinese hamster ovary cell Proteomics 
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