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TranscriptomicsA Local Regulatory Network Around Three NAC Transcription Factors in Stress Responses and Senescence in Arabidopsis leaves (Botrytis cinerea infection).
A network model has been generated that describes the immediate gene expression cascade surrounding three similar but distinct NAC transcription factors that have roles to play in leaf senescence and in many stress responses in Arabidopsis. ANAC019, ANAC055 and ANAC072 belong to the same clade of N...
ORGANISM(S): Arabidopsis thaliana 
2013-04-23 | E-GEOD-45594 | biostudies-arrayexpress
TranscriptomicsA Local Regulatory Network Around Three NAC Transcription Factors in Stress Responses and Senescence in Arabidopsis leaves (expression between lines at timepoints).
A network model has been generated that describes the immediate gene expression cascade surrounding three similar but distinct NAC transcription factors that have roles to play in leaf senescence and in many stress responses in Arabidopsis. ANAC019, ANAC055 and ANAC072 belong to the same clade of N...
ORGANISM(S): Arabidopsis thaliana 
2013-04-23 | E-GEOD-45183 | biostudies-arrayexpress
ProteomicsSalmon liver proteomics - Liver proteome response of pre-harvest Atlantic salmon following exposure to elevated temperature
Atlantic salmon production in Tasmania (Southern Australia) occurs near the upper limits of the species thermal tolerance. Summer water temperatures can average over 19°C over several weeks and have negative effects on performance and health. Liver tissue exerts important metabolic functions in ther...
ORGANISM(S): Salmo salar (Atlantic salmon) 
2018-03-01 | PXD004985 | Pride
Thermal stress Aquaculture Proteomics 
ProteomicsSalmon liver proteomics - Preliminary Validation of a High Docosahexaenoic Acid (DHA) and -Linolenic Acid (ALA) Dietary Oil Blend: Tissue Fatty Acid Composition and Liver Proteome Response in Atlantic Salmon (Salmo salar) Smolts
Novel DHA-enriched oils with high α-linolenic acid (ALA) content will be available in the near future as an alternative for dietary fish oil replacement in aquafeeds. As preliminary validation, we 1) assessed the ability of a diet containing a formulated oil blend (tuna oil + flaxseed oil, TOFX) wit...
ORGANISM(S): Salmo salar (Atlantic salmon) 
2018-03-01 | PXD004114 | Pride
Aquaculture Fish oil replacement Nutrition Proteomics 
ProteomicsEffect of ploidy on Salmon physiology - White muscle
This study investigated firstly, the impact of ploidy on growth performance and whole body composition of Atlantic salmon at different early freshwater stages (34 dph (days post-hatching) alevin; 109 dph; fry and 162 dph parr;) and secondly, whether phenotypic differences at these stages were reflec...
ORGANISM(S): Salmo salar (Atlantic salmon) 
2017-12-14 | PXD005451 | Pride
Muscle Salmon Ploidy 
ProteomicsEffect of ploidy on Salmon physiology - Liver
This study investigated firstly, the impact of ploidy on growth performance and whole body composition of Atlantic salmon at different early freshwater stages (34 dph (days post-hatching) alevin; 109 dph; fry and 162 dph parr;) and secondly, whether phenotypic differences at these stages were reflec...
ORGANISM(S): Salmo salar (Atlantic salmon) 
2017-12-14 | PXD005450 | Pride
Salmon Ploidy Liver 
ProteomicsEffect of ploidy on Salmon physiology - Whole fish larvae
This study investigated firstly, the impact of ploidy on growth performance and whole body composition of Atlantic salmon at different early freshwater stages (34 dph (days post-hatching) alevin; 109 dph; fry and 162 dph parr;) and secondly, whether phenotypic differences at these stages were reflec...
ORGANISM(S): Salmo salar (Atlantic salmon) 
2017-12-14 | PXD005452 | Pride
Salmon Larvae Ploidy 
TranscriptomicsArabidopsis defense against Botrytis cinerea: chronology and regulation deciphered by high-resolution temporal transcriptomic analysis (time series)
A novel experimental design strategy (A Mead et al, in preparation), based on the principle of the M-bM-^@M-^\loop designM-bM-^@M-^], was developed to enable efficient extraction of information about key sample comparisons using a two-colour hybridisation experimental system. With 192 distinct sampl...
ORGANISM(S): Arabidopsis thaliana 
2012-10-02 | E-GEOD-29642 | biostudies-arrayexpress
ProteomicsSsalar - Liver, iBAQ (Nuez-ortinetal,bmcgenomics2018)
abundance based on iBAQ, Interaction consistency score: 4.4, Coverage: 8
ORGANISM(S): 8030 
2018-00-00 | 557577734 | PAXDB
ProteomicsSsalar - Liver, iBAQ (Nuez-ortinetal,plosone2016)
abundance based on iBAQ, Interaction consistency score: 4.8, Coverage: 7
ORGANISM(S): 8030 
2016-00-00 | 587673189 | PAXDB
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