Cross-species proteomics

Show results for

Proteomics (299)
Unknown (218)
Genomics (11)
Metabolomics (11)
Transcriptomics (6)
Other (2)
Models (1)
Multiomics (1)

Organisms

Homo sapiens (12)
Mus musculus (5)
Canis lupus familiaris (4)
Rattus norvegicus (3)
Borreliella burgdorferi (2)
Bos taurus (2)
Bacteroides cellulosilyticus (1)
Ectocarpus siliculosus (1)
Saccharomyces cerevisiae (1)
Cunninghamia lanceolata (1)
Ctenopharyngodon idella (1)
Andrias davidianus (1)
Andrias davidianus ranavirus (1)
Bordetella bronchiseptica 1289 (1)
Bungarus multicinctus (1)
Bungarus sindanus (1)
Calligonum leucocladum (1)
Dietzia sp. DQ12-45-1b (1)
Naja philippinensis (1)
Naja samarensis (1)
Naja sumatrana (1)
Ovophis convictus (1)
Ovophis okinavensis (1)
Ovophis tonkinensis (1)
Popeia (1)
Pseudomonas protegens Pf-5 (1)
Rana grylio virus 9506 (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Spinacia oleracea (1)
Streptococcus gordonii str. Challis substr. CH1 (1)

Organisms

Homo sapiens (2)
Oreochromis niloticus (1)
Ctenopharyngodon idella (1)
Cunninghamia lanceolata (1)
Mus musculus (1)

Repository

pride (225)
iProX (27)
MassIVE (25)
PAXDB (13)
MetaboLights (11)
ENA (9)
geo (7)
biostudies-arrayexpress (5)
PanoramaPublic (3)
GPMDB (2)
jPOST (2)
BioModels (1)

Tissue

Cell culture (23)
Brain (11)
Blood plasma (10)
Plant cell (9)
Epithelial cell (7)
Whole body (7)
Blood cell (6)
Permanent cell line cell (6)
Blood (5)
Colon (5)
Heart (5)
Leaf (5)
Embryo (4)
Liver (4)
Skin (4)
Sperm (4)
Blood platelet (3)
Blood serum (3)
Cell suspension culture (3)
Kidney (3)
Lung (3)
Protonema (3)
Stem cell (3)
Antenna (2)
Bone (2)
Bone marrow (2)
Cell line cell (2)
Early embryonic cell (2)
Endosperm (2)
Extracellular vesicle (2)

Disease

Glioblastoma (3)
Not Available (2)
Colon cancer (2)
Crohn's disease (2)
Disease free (2)
Inflammatory bowel disease (2)
Malaria (2)
Parasitic helminthiasis infectious disease (2)
Parkinson's disease (2)
Type 2 diabetes mellitus (2)
Ulcerative colitis (2)
Acute leukemia (1)
Atherosclerosis (1)
Autism spectrum disorder (1)
Brain cancer (1)
Breast cancer (1)
Brucella canis brucellosis (1)
Cardiovascular system disease (1)
Cystic fibrosis (1)
Dental caries (1)
Fibrosarcoma (1)
Filarial elephantiasis (1)
Fungal meningitis (1)
Liver disease (1)
Lung adenocarcinoma (1)
Lung squamous cell carcinoma (1)
Malignant mesothelioma (1)
Neuroblastoma (1)
Plasmodium falciparum malaria (1)
Plasmodium vivax malaria (1)

Technology Type

Mass Spectrometry (225)
Shotgun proteomics (96)
Bottom-up proteomics (54)
Chemical cross-linking coupled with mass spectrometry proteomics (36)
Data-independent acquisition (36)
Data-dependent acquisition (21)
Gel-based experiment (12)
Mass spectrometry (10)
Affinity purification coupled with mass spectrometry proteomics (9)
SWATH MS (8)
DiaPASEF (2)
HDMSE (2)
Top-down proteomics (2)
Mass spectrometry assay (1)
Affinity proteomics (1)
All-ion fragmentation (1)
Immunopeptidomics (1)
MSE (1)
Metaproteomics (1)
Proteogenomics (1)
SRM/MRM (1)

Instrument Platform

Orbitrap Fusion Lumos (6)
Q Exactive HF-X (4)
Liquid Chromatography MS - positive - reverse phase (4)
Direct infusion MS - positive (3)
Instrument (2)
Q Exactive (2)
Direct infusion MS - negative (2)
LTQ Orbitrap XL (Thermo Scientific) (2)
Liquid Chromatography MS - negative - reverse phase (2)
6490 Triple Quadrupole LC/MS (1)
Agilent 6520 time-of-flight mass spectrometer (1)
Agilent 6550 LC-MS/MS (1)
Agilent 7890A GC with 5975C inert XL MSD (1)
In-house built IMS-MS with Agilent 6538 QTOF MS (1)
LTQ (1)
LTQ Orbitrap (1)
LTQ Orbitrap Velos (1)
LTQ Orbitrap XL (1)
Orbitrap Astral (1)
Orbitrap Fusion (1)
Orbitrap Fusion ETD (1)
Q Exactive Plus (1)
Q-Exactive (Thermo Fisher) (1)
QTRAP 6500+ (1)
RapidFire 365 coupled with Agilent 6560 Ion Mobility QTOF (1)
SLIM TWIMS-MS coupled with Agilent 6224 TOF (1)
TimsTOF Pro 2 (1)
TripleTOF 5600 (1)
MaXis (Bruker) (1)
MS Imaging - (1)

Publication Date

2026 (57)
2024 (39)
2023 (39)
2025 (34)
2022 (30)
2021 (27)
2020 (21)
2019 (20)
2018 (12)
2017 (9)
2015 (9)
2014 (7)
2016 (6)
2013 (5)
2007 (1)

UNIPROT ID/AC

A5ACR7_VITVI (5)
A5ADJ5_VITVI (5)
A5ADV7_VITVI (5)
A5AE63_VITVI (5)
A5AEB4_VITVI (5)
A5AEH1_VITVI (5)
A5AEI0_VITVI (5)
A5AFH3_VITVI (5)
A5AFX4_VITVI (5)
A5AGD5_VITVI (5)
A5AGN5_VITVI (5)
A5AHJ5_VITVI (5)
A5AHY0_VITVI (5)
A5AJ83_VITVI (5)
A5AJY2_VITVI (5)
A5AKD8_VITVI (5)
A5AL04_VITVI (5)
A5ALB2_VITVI (5)
A5ALT5_VITVI (5)
A5ALV6_VITVI (5)
A5AML5_VITVI (5)
A5ANR7_VITVI (5)
A5ANX3_VITVI (5)
A5AP38_VITVI (5)
A5APB9_VITVI (5)
A5APR3_VITVI (5)
A5AQ47_VITVI (5)
A5AQ65_VITVI (5)
A5AQ89_VITVI (5)
A5AR17_VITVI (5)

CHEBI ID

CHEBI:134254 (2)
CHEBI:64517 (2)
CHEBI:28478|CHEBI:17445|CHEBI:18101 (1)
CHEBI:134253 (1)
CHEBI:190216 (1)
CHEBI:180468 (1)
CHEBI:141311 (1)
CHEBI:137195 (1)
CHEBI:137899 (1)
CHEBI:178052 (1)
CHEBI:187785 (1)
CHEBI:142363 (1)
CHEBI:78128 (1)
CHEBI:78068 (1)
CHEBI:79007 (1)
CHEBI:78127 (1)
CHEBI:78069 (1)
CHEBI:78053 (1)
CHEBI:78893 (1)
CHEBI:78072 (1)
CHEBI:62920 (1)
CHEBI:78125 (1)
CHEBI:78049 (1)
CHEBI:25626 (1)
CHEBI:36434 (1)
CHEBI:78124 (1)
CHEBI:137434 (1)
CHEBI:78123 (1)
CHEBI:78095 (1)
CHEBI:78122 (1)

Metabolite Name

Tryptophan (2)
Iberin N-acetyl-cysteine (1)
Fatty Acid Hydroxy-C15:3-GLC (1)
Fatty Acid Dicarboxylic C14:1-GLC (1)
Fatty Acid Hydroxy-C13:1-GLC (1)
Dihydroxyphenyl-gamma-valerolactone-O-sulfate (1)
Cyclohexane carboxylic acid glycine (1)
Cyclohexadiene carboxylic acid glycine (1)
Absicic Acid Glucuronide (1)
7-Beta-Hydroxylathyrol (1)
PAF (1)
Heliocurassavicine N-Oxyde (1)
22A-Acetoxy-3-Stictanone (1)
Dl-Norleucine (1)
Desmethylenylnocardamine (1)
8-Oxoerythraline Epoxide (1)
1-Cyclohexyl-1-Phenyl-3-Piperidin-1-Ylpropan-1-Ol (1)
Dehydrolucidenic Acid A (1)
13-Oxyingenol Dodecanoat (1)
Sphinganine Related Molecules (1)
3-Amino-1H-Quinazoline-2,4-Dione (1)
3-[(Z)-Heptadec-10-Enyl]Benzene-1,2-Diol (1)
Deoxysappanone B 7,4'-Dimethyl Ether (1)
Cearoin (1)
Alpha-Hydroxydeoxycholic Acid (1)
(2E,4E)-N-(2-Methylpropyl)Dodeca-2,4-Dienamide (1)
Phenylethylamide (1)
5-Chloroindole-2-Carboxylic Acid (1)
2,3-Dideoxycytidine (1)
2-Acetoxy-4-Pentadecylbenzoic Acid (1)

IsPrivate

False (1)

First Public Date

2026 (4)
2021 (2)
2025 (1)
2020 (1)
2018 (1)

Modelling Approach

Constraint-based model (1)

Modification

6x(2)H labeled dimethylated L-arginine (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (2)
Proteomic profiling by array (2)
RNA-seq of coding RNA (1)

Release Date

2025 (34)
2021 (25)
2023 (19)
2024 (16)
2018 (16)
2022 (15)
2019 (14)
2020 (13)
2017 (10)
2016 (9)
2015 (9)
2014 (8)
2009 (7)
2013 (6)
2007 (6)
2026 (5)
2012 (3)
2011 (2)
2010 (2)
2008 (2)
2006 (1)
2004 (1)

Lab affiliation

Professor, Deputy Head of Centre Novo Nordisk Foundation Center for Protein Research University of Copenhagen Copenhagen, DENMARK (6)
King's College London (4)
Technical University of Munich, School of Medicine, Institute of Virology, 81675 Munich, Germany (3)
University of Washington (3)
Administrerende Direktør • Novo Nordisk Foundation Center for Protein Research (2)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany; Wellcome Centre for Cell Biology, University of Edinburgh, Edinburgh EH9 3BF, UK. (2)
Biochemistry and Molecular Biology Department, Eberly College of Science, Pennsylvania State University, University Park, PA, USA. (2)
Cornell University (2)
Department of Systems Immunology, Weizmann Institute of Science, Rehovot, Israel (2)
Director at Max Planck Institute of Biochemistry Department Proteomics und Signaltransduktion Am Klopferspitz 18, 82152 Martinsried (2)
Manchester Institute of Biotechnology, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK Interdisciplinary Centre for Ancient Life, Department of Earth and Environmental Sciences, University of Manchester, Oxford Road 131, Manchester, M13 9PL, UK (2)
Melbourne Veterinary School, Faculty of Science, The University of Melbourne, Parkville, Victoria, Australia (2)
North Carolina State University (2)
1-Tyrolean Cancer Research Institute (TKFI), Innrain 66, A-6020 Innsbruck, Austria 2-Institute of Molecular Biology and Center for Molecular Biosciences, University of Innsbruck, Technikerstrasse 25, A-6020 Innsbruck, Austria. (1)
1. Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands 2. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
1. Department of Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany 2. Wellcome Trust Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3JR, United Kingdom (1)
1. Laboratoire de Spectrométrie de Masse BioOrganique, IPHC UMR 7178, Université de Strasbourg, CNRS, 67000 Strasbourg, France 2. Infrastructure Nationale de Protéomique ProFI – FR2048, 67087 Strasbourg, France (1)
1The Finsen Laboratory, Rigshospitalet, Faculty of Health Sciences, University of Copenhagen, Denmark; 2Biotech Research and Innovation Centre (BRIC), University of Copenhagen, Copenhagen, Denmark; 3Danish Stem Cell Centre (DanStem) Faculty of Health Sciences, University of Copenhagen, Denmark (1)
Agriculture and Agri-Food Canada, Ottawa Research and Development Centre (1)
Assistant Professor, Faculty of Dentistry, National University of Singapore (1)
Associate Professor of Medicine, Division of Infectious Diseases, Department of Medicine, Washington Univerisity in St Louis (1)
Bioanalytical Mass Spectrometry Research Group, Chemistry Department, Université du Québec à Montréal (UQAM) Montréal (Québec) Canada (lab head) (1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany (1)
Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, 97074 Würzburg, Germany (1)
Biological chemistry department, Alexander Silberman Institute Of Life Sciences, Hebrew University (1)
Biomolecular Mass Spectrometry & Proteomics, Bijvoet Centre for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, 3584 CH Utrecht, The Netherlands (1)
CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China (1)
CR University Grenoble Alpes, Institute for Advanced Biosciences, Inserm U1209, CNRS UMR 5309, Grenoble, France (1)
Carnegie Mass Spectrometry Facility (1)
Cell Biology, Harvard Medical School, Boston, MA 02115 (1)

Tags

xref:PubMed:33761362 (2)
xref:PubMed:42450331 (1)
xref:PubMed:42669598 (1)
xref:PubMed:41109686 (1)

Previous page
1 / 55
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 55
Next page

Sort by:

Relevance

Page size

Cross-species proteomics in analysis of mammalian sperm proteins C4PR_LIV

Many proteomics studies are conducted in ‘model’ organisms for which a fully annotated and detailed, high quality proteome is available. By contrast, many studies in ecology and evolution lack a high quality proteome data set that can be used for protein discovery and quantification. This is particu...

ORGANISM(S): Bos taurus (Bovine) Mus musculus (Mouse) Sus scrofa domesticus (domestic pig) Rattus norvegicus (Rat) Equus caballus (Horse)

2020-09-07 | PXD003164 | Pride

Cross-species proteomic comparison of whole cell lysates, outer membrane vesicles and membrane fractions of Francisella tularensis subsp. tularensis versus subsp. holarctica

Secretion of outer membrane vesicles (OMV) presents an important phenomenon in Gram-negative bacteria and they play multiple roles in their lifestyle including virulence and host-pathogen interaction. Francisella tularensis secretes unusually shaped tubular OMV. We here present a proteomic compariso...

ORGANISM(S): Francisella tularensis Francisella tularensis subsp. tularensis SCHU S4 Francisella tularensis subsp. holarctica FSC200

2021-02-08 | PXD022406 | Pride

Q-exactive Schus4 Outer membrane vesicles Fsc200 Cross-species proteomic comparison Francisella tularensis

Multi-cohort, cross-species urinary proteomics reveals LRRK2 dysfunction in Parkinson's disease

Not available

S-SCDT-10_1038-S44320-026-00190-0 | biostudies-other

Cross-species proteomics reveals specific modulation of signaling in cancer and stromal cells by phosphoinositide 3-kinase (PI3K) inhibitors.

Not available

S-EPMC4047466 | biostudies-literature

On-target, dual aminopeptidase inhibition provides cross-species antimalarial activity

To combat the global burden of malaria, development of new drugs to replace or complement current therapies are urgently required. As drug resistance to existing treatments and clinical failures continue to rise, compounds targeting multiple life cycle stages and species need to be developed as a hi...

ORGANISM(S): Homo sapiens (Human)

2024-05-06 | PXD046006 | Pride

Malaria Antimalarial Plasmodium falciparum

"Controlled, cross-species dataset for exploring biases in genome annotation and modification profiles".

Not available

S-EPMC4660258 | biostudies-literature

PTMoreR-enabled cross-species PTM mapping and comparative phosphoproteomics across mammals.

Not available

S-EPMC11440062 | biostudies-literature

Cross-Species Proteomics Identifies CAPG and SBP1 as Crucial Invasiveness Biomarkers in Rat and Human Malignant Mesothelioma.

Not available

S-EPMC7564583 | biostudies-literature

Identification of conserved cross-species B-cell linear epitopes in human malaria: a subtractive proteomics and immuno-informatics approach targeting merozoite stage proteins.

Not available

S-EPMC10884153 | biostudies-literature

Cross-species Comparison of Proteome Turnover Kinetics.

Not available

S-EPMC5880112 | biostudies-literature

Previous page
1 / 55
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 55
Next page

Sort by:

Relevance

Page size

548 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

IsPrivate

First Public Date

Modelling Approach

Modification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets