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MetabolomicsMetabolome of the Medicago truncatula symbiosome space, bacteroid, and nodule cytosol
This study characterizes the metabolome of the Medicago truncatula-Sinorhizobium meliloti symbiosis. Symbiosome space, bacteroid, and nodule cytosol fractions were isolated from 4-week-old root nodules and profiled by untargeted liquid chromatography-tandem mass spectrometry (LC-MS/MS). Polar metabo...
2026-08-19 | MTBLS15392 | MetaboLights
TranscriptomicsRibosome footprinting in the cytosol and endoplasmic reticulum
In eukaryotic cells, the spatial regulation of protein expression is frequently conferred through the coupling of mRNA localization and the local control of translation. mRNA localization to the endoplasmic reticulum (ER) is a prominent example of such regulation and serves a ubiquitous role in segr...
ORGANISM(S): Homo sapiens 
2011-12-20 | E-GEOD-31539 | biostudies-arrayexpress
GenomicsTranscriptome profiling of cytosol, endoplasmic reticulum (ER), and pellet fraction from the Xenopus laevis oocyte and mature egg
Transcriptome profiling of cytosol, endoplasmic reticulum (ER), and pellet fraction from the Xenopus laevis oocyte and mature egg
PRJNA819062 | ENA
ProteomicsiTRAQ Analysis of DJ-1 Knockout Rodent Brains
Mutations in the DJ-1 (Park7) gene cause autosomal recessive Parkinson's disease in humans, but the function of the DJ-1 protein is poorly characterized. In an effort to understand more about the biology of DJ-1, we performed iTRAQ analyses on subcellular fractions enriched from DJ-1 knockout rat an...
ORGANISM(S): Mus musculus (Mouse) Rattus norvegicus (Rat) 
2017-10-04 | PXD005215 | Pride
Cytosol Itraq Dj-1 Mitochondria Hexokinase Parkinson's Neurodegeneration Subcellular fractionation Aging 
ProteomicsReflux of Endoplasmic Reticulum proteins to the cytosol yields inactivation of tumor suppressors
In the past decades many studies reported the presence of Endoplasmic Reticulum (ER) resident proteins in the cytosol. However the mechanisms by which these proteins relocate and whether they exert cytosolic functions remain unknown. We found that select ER luminal proteins accumulate in the cytosol...
ORGANISM(S): Homo sapiens (Human) 
2021-05-03 | PXD023567 | Pride
Tumor cells Upr Endoplasmic reticulum 
UnknownThe membrane-associated fraction of cyclase associate protein 1 translocates to the cytosol upon platelet stimulation.
Not available
S-EPMC6050311 | biostudies-literature
UnknownStudying relative RNA localization from nucleus to the cytosol.
Not available
S-EPMC12204760 | biostudies-literature
TranscriptomicsTranscriptome profiling of cytosol, endoplasmic reticulum (ER), and pellet fraction from the Xenopus laevis oocyte and mature egg
This genome-wide transcriptome analysis was aimed to reveal dynamic regulation of mRNA-ER association during Xenopus oocyte maturation. We extracted RNAs from the cytosolic, ER, and the pellet fraction of oocytes and eggs, respectively, and performed RNA-sequencing. These results showed that mRNA-ER...
ORGANISM(S): Xenopus laevis 
2022-12-13 | GSE199254 | GEO
UnknownDistinct role of rab27a in granule movement at the plasma membrane and in the cytosol of NK cells.
Not available
S-EPMC2943471 | biostudies-literature
UnknownEndo-beta-N-acetylglucosaminidase, an enzyme involved in processing of free oligosaccharides in the cytosol.
Not available
S-EPMC124980 | biostudies-literature
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