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MetabolomicsGNPS_Sorangium cellulosum So ce38 and So ceGT47, various media, auto-MS2 and SPL-MS2
MS2 data set resulting from the SPL-MS2 method development as described in the publication mentioned below. The data set is based on triplicate measurements (technical) of various extracts. Extracts are mixtures of three biological replicates (see publication for explanation). In addition, blank ext...
ORGANISM(S): Sorangium Cellulosum So Ce38 Sorangium Cellulosum So Cegt47 
2014-12-07 | MSV000078960 | GNPS
TranscriptomicsMolecular anatomy of gene expression responses in stressed hepatocytes
It is well-known that isolation and cultivation of primary hepatocytes causes major gene expression alterations. In the present genome-wide, time resolved study of cultivated human and mouse hepatocytes, we made the observation that expression changes in culture strongly resemble alterations in live...
ORGANISM(S): Mus musculus 
2016-09-28 | E-MTAB-4444 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human macrophage Mono-Mac-6 cell or HUVEC cell one treated with leukotriene
Human umbilical vein endothelial cells (HUVEC) or the human macrophage cell line, Mono-Mac-6, treated with Leukotriene D4 for 1 hour
ORGANISM(S): Homo sapiens 
2008-06-12 | E-GEOD-1644 | biostudies-arrayexpress
GenomicsgDNA-seq of 7G8 subclones with different var expression patterns
The parasite Plasmodium falciparum is responsible for severe malaria, which remains a major cause of death, particularly in sub-Saharan Africa. The reference strain NF54 (or its subclone 3D7) is commonly used for controlled human malaria infection (CHMI), but recently strains with a different geogra...
ORGANISM(S): Plasmodium falciparum 
2022-09-22 | E-MTAB-12158 | biostudies-arrayexpress
OtherCell physiology of the biotechnological relevant bacterium Bacillus pumilus-an omics-based approach.
Data from ProteomeXchange, PXD ID: PXD000780. Experiment: O2_U1_gmr_sh_11_1, file: 100223_O2_U1_gmr_sh_11_1_4.mzml. Published as part of J Biotechnol. 2014 Dec 20;192 Pt A:204-14 . From the Abstract: {{i}} Members of the species Bacillus pumilus get more and more in focus of the biotechnological in...
ORGANISM(S): Crap, Bacillus_pumilus_safr_032 
GPM32310018327 | GPMDB
Resource Reanalysis 
TranscriptomicsRNA-seq of 7G8 cell bank parasites
The parasite Plasmodium falciparum is responsible for severe malaria, which remains a major cause of death, particularly in sub-Saharan Africa. The reference strain NF54 (or its subclone 3D7) is commonly used for controlled human malaria infection (CHMI), but recently strains with a different geogra...
ORGANISM(S): Plasmodium falciparum 7G8 
2022-09-22 | E-MTAB-12157 | biostudies-arrayexpress
ProteomicsYAGsn2_48rpt
replicate enrichment for soluble proteins; 400-800 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):511
ORGANISM(S): Halobacterium Nrc-1 (halobacterium) 
2006-12-31 | PAe000218 | PeptideAtlas
TranscriptomicsmiR-155 regulates the ability of circulating cancer cells to colonize and establish metastasis
Abstract: Metastases are established through a complex multistep process by which tumor cells disseminate from the primary tumor and expand at distant sites. Traditionally, studies on metastasis have focused on proteins and protein-coding genes, but recently microRNAs (miRNAs) have achieved increasi...
ORGANISM(S): Homo sapiens 
2012-05-02 | E-GEOD-37719 | biostudies-arrayexpress
ProteomicsYAGmem1220
enrichment for membrane proteins; GPF 1200-2000 m/z; Goo et al., 2003, Mol Cell Proteomics 2(8):506
ORGANISM(S): Halobacterium Nrc-1 (halobacterium) 
2006-12-31 | PAe000217 | PeptideAtlas
ProteomicsYAGwall
enrichment for Halobacterium cell wall proteins, Goo et al., unpublished data.
ORGANISM(S): Halobacterium Nrc-1 (halobacterium) 
2006-12-31 | PAe000209 | PeptideAtlas
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