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ProteomicsComparison of Drosophila melanogaster adult and embryo proteome
Embryo and adult flies infected with Wolbachia pipientis or cured were lysed in a SDS containing buffer and digested with trypsin using in gel digestion. The resulting peptides were injected on a Sciex Triple-TOF 6600 in SWATH-MS mode. The data were analysed using Spectronaut 10 using the spectral l...
ORGANISM(S): Drosophila Melanogaster (ncbitaxon:7227) 
2018-08-10 | MSV000082812 | MassIVE
ProteomicsPhospoproteome along the dorso-ventral axis of the early Drosophila embryo
The initially homogeneous epithelium of the early Drosophila embryo differentiates into regional subpopulations with different behaviours and physical properties that are needed for morphogenesis. The factors at top of the genetic hierarchy that control these behaviours are known, but many of their ...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2024-10-01 | PXD046192 | Pride
Phosphorylation Embryo Drosophila Lc-ms/ms 
ProteomicsProteome along the dorso-ventral axis of the early Drosophila embryo
The initially homogeneous epithelium of the early Drosophila embryo differentiates into regional subpopulations with different behaviours and physical properties that are needed for morphogenesis. The factors at top of the genetic hierarchy that control these behaviours are known, but many of their ...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2024-10-01 | PXD046050 | Pride
Drosophila Embryo Development Lc-ms/ms 
ProteomicsSpectral library of Drosophila melanogaster for SWATH-MS
A spectral library was built for Drosophila melanogaster. The spectral library allows reproducible quantification for thousands of peptides per SWATH-MS analysis. Proteins from Drosophila melanogaster embryo, adult flies were digested with trypsin using in-gel digestion and the peptides were fracti...
ORGANISM(S): Drosophila Melanogaster (ncbitaxon:7227) 
2017-05-11 | MSV000081075 | MassIVE
ProteomicsDrosophila melanogaster proteome dynamics during embryogenesis - 1
In this study we use a combination of proteomics Label-Free quantification methods to monitor protein expression changes over a time course of more than 20 hours of embryo development in Drosophila melanogaster.
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2016-04-11 | PXD003178 | Pride
Drosophila melanogaster  label-free quantification  swath 
ProteomicsProteome Plasticity in Drosophila Hybrids
This submission contains 3 different datasets: - series A: D. melanogaster female ? D. simulans male embryos vs internal standard of pooled D. simulans and D. melanogaster (1:1) embryos - series B: D. simulans female ? D. melanogaster male embryos vs internal standard of pooled D. simulans and D. m...
ORGANISM(S): Drosophila Melanogaster (ncbitaxon:7227) Drosophila Simulans (ncbitaxon:7240) 
MSV000081535 | MassIVE
ProteomicsThe histone chaperone NASP maintains H3-H4 reservoirs in the early Drosophila embryo
Histones are essential for chromatin packaging and histone supply must be tightly regulated as excess histones are toxic. To drive the rapid cell cycles of the early embryo, however, excess histones are maternally deposited. Therefore, soluble histones must be buffered by histone chaperones but the ...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2023-02-23 | PXD036809 | Pride
Histone Nasp H3-h4 Histone chaperone Ip-ms 
ProteomicsSILAC-based quantitative proteomic analysis of Drosophila gastrula stage embryos mutant for fibroblast growth factor signalin
Quantitative mass spectrometry-based proteomic analyses in combination with genetics provide powerful tools in developmental cell signaling research. Drosophila melanogaster is one of the most widely used genetic models for studying development and disease. Here we combined quantitative proteomics w...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2021-09-09 | PXD016438 | Pride
Silac Drosophila 
ProteomicsGene expression dynamics before and after zygotic gene activation in Drosophila early embryogenesis
Post-transcriptional gene regulatory mechanisms are fundamental to the determination of gene expression dynamics and especially crucial for the earliest stages of animal development in which transcription is nearly silent. Here we performed high-resolution total RNA-sequencing and quantitative mass ...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2025-09-08 | PXD057383 | Pride
Drosophila mzt development 
ProteomicsDrosophila mRNA Interactome - Global changes of the RNA-bound proteome during the maternal-to-zygotic transition in Drosophila
The maternal-to-zygotic transition (MZT) is a process that occurs in animal embryos at the earliest developmental stages, during which maternally deposited mRNAs and other molecules are degraded and replaced by products of the zygotic genome. The zygotic genome is not activated immediately upon fert...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2016-07-11 | PXD003882 | Pride
Tmt-ms3 Drosophila development Rna-binding proteins 
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