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ProteomicsA viral ORFeome library for systems-level genetic dissection of host-pathogen interactions
Virological research has traditionally focused on individual viruses or viral families. Advances in DNA synthesis now allow large-scale construction of individual gene products, enabling systematic exploration of the virome. Here, we developed a barcoded library of ~12,000 viral open reading frames ...
ORGANISM(S): Homo sapiens (Human) 
2026-09-07 | PXD077768 | Pride
Virome Mc162r Yldv 151r Tmt Mhc 
UnknownDif1 is a DNA-damage-regulated facilitator of nuclear import for ribonucleotide reductase.
Not available
S-EPMC3245869 | biostudies-literature
UnknownA quantitative atlas of mitotic phosphorylation.
Not available
S-EPMC2504835 | biostudies-literature
ProteomicsCellular response to arsenite in TXNL1-depleted cells
TMT-MS of total proteomes of TXNL1-KO HEK293T cells or TXNL1-KO cells complemented with wild type and proteasome binding deficient mutant (D162R, R234D) version of TXNL1 treated with or without 100 µM arsenite for 3 hours.
ORGANISM(S): Homo sapiens (Human) 
2025-05-28 | PXD052933 | Pride
Thioredoxin Tmt Lc-ms Proteasome Arsenite 
UnknownE3 ligase autoinhibition by C-degron mimicry maintains C-degron substrate fidelity.
Not available
S-EPMC10080726 | biostudies-literature
ProteomicsNudt21 controls cell fate by connecting alternative polyadenylation to chromatin signaling
Cell fate transitions involve rapid changes of gene expression patterns and global chromatin remodeling, yet the underlying regulatory pathways remain incompletely understood. Here, we used transcription-factor induced reprogramming of somatic cells into pluripotent cells to screen for novel regulat...
ORGANISM(S): Mus musculus (Mouse) 
2018-01-08 | PXD008078 | Pride
Nudt21 tmt 
UnknownStructure of the TXNL1-bound proteasome.
Not available
S-EPMC12700798 | biostudies-literature
UnknownDiversified Application of Barcoded PLATO (PLATO-BC) Platform for Identification of Protein Interactions.
Not available
S-EPMC6818353 | biostudies-literature
UnknownIdentification of the FANCI protein, a monoubiquitinated FANCD2 paralog required for DNA repair.
Not available
S-EPMC2175179 | biostudies-literature
TranscriptomicsPrimary TNBC tumor in the presence or absence of SHP2
The first bona fide PTP proto-oncogene was the Src-homology 2 domain-containing phosphatase SHP2 (encoded by PTPN11), an ubiquitously expressed PTP that transduces mitogenic, pro-survival, cell fate and/or pro-migratory signals from numerous growth factor-, cytokine- and extracellular matrix recepto...
ORGANISM(S): Homo sapiens 
2012-01-16 | E-GEOD-35118 | biostudies-arrayexpress
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