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TranscriptomicsCSF2 x gender interactions on the transcriptome of Day 15 bovine extra-embryonic membrane
We aimed to study the effects of CSF2 treatment on the transcriptome of the Day 15 female and male embryo. Within the raw files, channel 1= Cy3 and channel 2= Cy5 Transcriptional profiling of bovine extra-embryonic membrane at Day 15 post-insemination produced by IVF. Oocytes were matured and ferti...
ORGANISM(S): Bos taurus 
2014-10-01 | E-GEOD-55364 | biostudies-arrayexpress
ProteomicsRickettsia raoultii intra cellular bacteria global proteome
Semi quantitative intracellular bacteria proteome using a 2D nanoLC-M/MS analysis system enabling a maximum sample exploration. This setup was helpful to analyse this complex sample composed of peptides from the studied bacteria and its host. Sample was doped before injection in order to calculate p...
ORGANISM(S): Rickettsia raoultii Xenopus laevis (African clawed frog) 
2018-10-25 | PXD003193 | Pride
Hdmse Xenopus laevis Rickettsia Hi3 
ProteomicsRickettsia conorii intra cellular bacteria global proteome
Semi quantitative intracellular bacteria proteome using a 2D nanoLC-M/MS analysis system enabling a maximum sample exploration. This setup was helpful to analyse this complex sample composed of peptides from the studied bacteria and its host. Sample was doped before injection in order to calculate p...
ORGANISM(S): Rickettsia conorii (strain ATCC VR-613 / Malish 7) 
2018-10-25 | PXD003194 | Pride
Hdmse Xenopus laevis Rickettsia Hi3 
ProteomicsRickettsia massiliae intra cellular bacteria global proteome
Semi quantitative intracellular bacteria proteome using a 2D nanoLC-M/MS analysis system enabling a maximum sample exploration. This setup was helpful to analyse this complex sample composed of peptides from the studied bacteria and its host. Sample was doped before injection in order to calculate p...
ORGANISM(S): Rickettsia massiliae (strain Mtu5) Xenopus laevis (African clawed frog) 
2018-10-25 | PXD003197 | Pride
Hdmse Xenopus laevis Rickettsia Hi3 
ProteomicsRickettsia slovaca intra cellular bacteria global proteome
Semi quantitative intracellular bacteria proteome using a 2D nanoLC-M/MS analysis system enabling a maximum sample exploration. This setup was helpful to analyse this complex sample composed of peptides from the studied bacteria and its host. Sample was doped before injection in order to calculate p...
ORGANISM(S): Rickettsia slovaca (strain 13-B) 
2018-10-25 | PXD003195 | Pride
Hdmse Xenopus laevis Rickettsia Hi3 
TranscriptomicsLongitudinal scRNAseq profiling of memory B cells in mRNA vaccinated individuals post BA.1-breakthrough infection
Memory B cells play a fundamental role in host defenses against viruses. This dataset aimed at understanding the recruitment and remodeling of the memory B cell repertoire in the context of BA.1-breakthrough infection in BNT162b2 mRNA vaccinated individuals. All four donors enrolled in the study had...
ORGANISM(S): Homo sapiens 
2023-08-15 | E-MTAB-12651 | biostudies-arrayexpress
TranscriptomicsComparison of the DNA methylation of bovine blastocysts and bovine sperm
DNA from expanded bovine blastocysts and bovine sperm were extracted then subjected to methylation-sensitive enzymatic digestion and LM-PCR enrichment before being hybridized onto a microarray. Two-condition experiment, bovine blastocysts (pools of 10) vs bovine sperm. Four biological replicates of ...
ORGANISM(S): Bos taurus 
2014-09-09 | E-GEOD-57709 | biostudies-arrayexpress
TranscriptomicsComparison of L-carnitine treated day 6 in vivo bovine embryos to controls, in both the Jersey and Holstein breeds.
The decreased rate of pregnancy obtained in cattle using frozen in vitro embryos compared to in vivo embryos has been associated with over-accumulation of intracellular lipid, which causes cell damage during cryopreservation. It is believed that the higher lipid content of blastomeres of bovine embr...
ORGANISM(S): Bos taurus 
2014-10-23 | E-GEOD-62595 | biostudies-arrayexpress
TranscriptomicsContrast of poly-ribosomal mRNA in germina vesicle (GV) and metaphase II (MII) bovine oocytes.
Poly-ribosomal mRNA from pools of 75 bovine oocytes at the germinal vesicle(GV) and metaphase II(MII) stages were isolated by sucrose fractionation then compared through microarray hybridization. 3 biological replicates from germinal vesicle(GV) and metaphase II(MII) bovine oocytes were hybridized a...
ORGANISM(S): Bos taurus 
2014-09-09 | E-GEOD-56603 | biostudies-arrayexpress
TranscriptomicsComprehensive across production systems assessment of the impact of in vitro micro-environment on the expression of messengers and long non-coding RNAs in the bovine blastocyst
In vitro production of cattle embryos over the past two decades has revealed several negative impacts, which have been attributed to the artificial microenvironment. Studies of embryos produced in vitro clearly point to aberrant gene expression levels. So far, the causal association between phenotyp...
ORGANISM(S): Bos taurus 
2011-03-11 | E-GEOD-27872 | biostudies-arrayexpress
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