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ProteomicsMaize stroma - Reconstruction of metabolic pathways, protein expression, and homeostasis machineries across maize bundle sheath and mesophyll chloroplasts: large-scale quantitative proteomics using the first maize genome assembly
Band23 maize W22 stroma biological replica1 dec08 trypsin in gel-digestion Orbitrap 120 min gradient
ORGANISM(S): Zea mays (Maize) 
2010-01-25 | PRD000184 | Pride
ProteomicsMaize chloroplast membrane - Reconstruction of metabolic pathways, protein expression, and homeostasis machineries across maize bundle sheath and mesophyll chloroplasts: large-scale quantitative proteomics using the first maize genome assembly
Band10 maize WT-W22 leaf tip, chloroplast membrane mesophyl technical replica3 blue native trypsin Orbitrap
ORGANISM(S): Zea mays (Maize) 
2010-01-25 | PRD000189 | Pride
ProteomicsMaize leaf gradient - Structural and metabolic transitions of C4 leaf development and differentiation defined by microscopy and quantitative proteomics in maize
Band2 maize MO17 leaf gradient section1 (1cm) biological replica 1 SDS-PAGE trypsin Orbitrap
ORGANISM(S): Zea mays (Maize) 
2011-04-15 | PRD000199 | Pride
ProteomicsMaize leaf development - Structural and metabolic transitions of C4 leaf development and differentiation defined by microscopy and quantitative proteomics in maize
Band20 Maize WT-T43 BS strands soluble BGS (base green soluble) 1repl Marc07 trypsin in gel digest Orbitrap
ORGANISM(S): Zea mays (Maize) 
2011-04-15 | PRD000157 | Pride
ProteomicsSubcellular organization of single-cell C4 photosynthesis in Bienertia sinuspersici determined by large scale proteomics
Bienertia sinuspersici performs C4 photosynthesis without Kranz anatomy through subcellular compartmentalization of carbon fixation within individual cells. In this species, central compartment chloroplasts (C) and peripheral chloroplasts (P) collaborate with cytosolic and mitochondrial components i...
ORGANISM(S): Bienertia sinuspersici Arabidopsis thaliana (Mouse-ear cress) 
2015-03-17 | PXD001910 | Pride
Shotgun proteomics Bienertia sinuspersici Subcellular organization Single-cell c4 photosynthesis 
ProteomicsBienertia s. chloroplast compartments replica 2 CCCP band1to10
Bienertia sinuspersici performs C4 photosynthesis without Kranz anatomy through subcellular compartmentalization of carbon fixation within individual cells. In this species, central compartment chloroplasts (C) and peripheral chloroplasts (P) collaborate with cytosolic and mitochondrial components i...
ORGANISM(S): Bienertia sinuspersici 
2019-05-14 | PXD001814 | Pride
Development Chloroplast compartment Shorgun proteomics Bienertia sinuspersicis 
ProteomicsAnalysis of isolated Plastoglobules from Arabidopsis thaliana WT and M48 null mutants.
We studied the function of PG localized protease, PGM48 both in vitro and in vivo during natural senescence in Arabidopsis thaliana.Our results show that PGM48 is a metalloprotease and a senescence inducible protein. In vitro assay by recombinant protein revealed a proteolytic activity. Quantitative...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-04-09 | PXD003684 | Pride
Lc-msms Plastoglobules Arabidopsis thaliana Ltq-orbitrap Protease Chloroplast Quantitative proteomics 
ProteomicsFunction of clpF in the clp protease complex
The plant plastid Clp machinery comprises a hetero-oligomeric ClpPRT proteolytic core, ATP-dependent ClpC,D chaperones and an adaptor protein, ClpS1. ClpS1 directs a subset of substrates to the Clp protease-chaperone complex for degradation, but substrate recognition and delivery mechanisms are unkn...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-04-09 | PXD002186 | Pride
Lc-msms Plant cell Arabidopsis thaliana Coip Clp complex Chloroplast Stroma 
ProteomicsIn vivo trapping of proteins interacting with the chloroplast CLPC1 chaperone
The chloroplast stromal CLP protease system is essential for growth and development. It consists of a proteolytic CLP core complex that likely dynamically interacts with oligomeric rings of CLPC1, CLPC2 or CLPD AAA+ chaperones. These ATP-dependent chaperones are predicted to bind and unfold CLP prot...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-05-14 | PXD013494 | Pride
In vivo trapping-proteins interaction- chloroplast - clpc1 chaperone 
ProteomicsIn vivo trapping of proteins interacting with the chloroplast CLPC1 chaperone; potential substrates and adaptors
The chloroplast stromal CLP protease system is essential for growth and development. It consists of a proteolytic CLP core complex that likely dynamically interacts with oligomeric rings of CLPC1, CLPC2 or CLPD AAA+ chaperones. These ATP-dependent chaperones are predicted to bind and unfold CLP prot...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-04-10 | PXD013424 | Pride
Clpc1 chaperone in vivo trapping adaprotr substrate 
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