Frydman Judith J

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Transcriptomics (2)
Proteomics (2)

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Saccharomyces cerevisiae (2)
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biostudies-arrayexpress (2)
pride (2)

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Cell culture (1)

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Huntington Disease (1)

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Mass Spectrometry (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Shotgun proteomics (1)

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2016 (1)
2010 (1)
2024 (1)
2018 (1)

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Comparative genomic hybridization by array (1)
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2016 (1)
2010 (1)

Lab affiliation

Department of Biology, Stanford University, Stanford, USA (1)
Department of Biology, Stanford University, USA (1)

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Cotranslational signal independent SRP preloading during membrane targeting

Cotranslational targeting into the endoplasmic reticulum (ER) by the Signal Recognition Particle (SRP) is a key event determining polypeptide fate in eukaryotic cells. Here, we globally define the principles and mechanisms of SRP binding and ER targeting in vivo. Cotranslational targeting through SR...

ORGANISM(S): Saccharomyces cerevisiae

2016-08-03 | E-GEOD-74393 | biostudies-arrayexpress

Nuclear versus cytoplasmic VHL interactomes

Protein misfolding is linked to a wide variety of human disease. Protective cellular protein quality control (PQC) mechanisms evolved to selectively recognize misfolded proteins and limit their toxic effects. Using yeast as a model system, we previously discovered that the misfolded protein VHL inte...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2018-11-04 | PXD010660 | Pride

Polyglutamine-mediated ribotoxicity disrupts proteostasis and stress responses in Huntington’s Disease

Huntington’s disease (HD) is a neurodegenerative disorder caused by expansion of a CAG trinucleotide repeat in the Huntingtin (HTT) gene, encoding a homopolymeric polyglutamine (polyQ) tract. Although mutant HTT (mHTT) protein is known to aggregate, the links between aggregation and neurotoxicity re...

ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse)

2024-03-13 | PXD026012 | Pride

Eif5a Ribosome collision Ribosome stalling Huntington's disease Translation Aggregation

Trivalent arsenic inhibits the functions of chaperonin complex

The goal of this study was to identify yeast mutants with arsenite hypersensitivity. Keywords: dose response Matched pools of yeast knockout (YKO) mutants were grown in paired growth media lacking or containing arsenite at various concentrations. The relative abundances of the YKO mutants were profi...