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ProteomicsMS-based identification of small proteins in Campylobacter jejuni
The Gram-negative bacterium Campylobacter jejuni is a widespread food-borne pathogen. Knowing the proteins encoded by the bacterial pathogen and how their expression is regulated is essential to understand how it survives, colonizes, and causes diseases. The present study focusses on small proteins...
ORGANISM(S): Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 
2024-05-23 | PXD036790 | Pride
Ribosome profiling Gelfree fractionator Sorf Small proteins Gelc-ms/ms Campylobacter jejuni Translatome 
ProteomicsPATIENTS ANTIBODIES RECOGNIZED TWO ISOENZYMES OF GLYCERALDEHYDE -3P- DESHYDROGENASE OF ECHINOCOCCUS GRANULOSUS s. l. Cloning epitopes and enzymatic analysis in silico
Our group is working identifying antigens from E. granulosus s.l by immune-identification and LC-MS/MS methodologies, CE patient sera recognized antigens expressed by cell line from bovine’s protoscolices E .granulouss G1 (EGPE). The antigenic model from EGPE cells showed more sensitivity for patien...
ORGANISM(S): Echinococcus granulosus group 
2025-11-24 | PXD069559 | Pride
Echinococcus granulosus epitopes Glyceraldehyde -3p- deshydrogenase 
GenomicsA Genome-Wide Association Study of Fuchs' Endothelial Corneal Dystrophy (FECD)

Fuchs' Endothelial Corneal Dystrophy (FECD) is a common disease that results in loss of vision associated with progressive corneal edema and loss of corneal transparency. In the initial stages of the disease, excrescences on Descemet's membrane with the appearance of an abnormal posterior...

phs000421.v1.p1 | EGA
ProteomicsProtein co-immmunoprecipitation using antibodies specific for the antimicrobial peptide FsPDF2 from Fagus sylvatica
To assess the specificity of the antibodies used in the quantitative sandwich ELISA, co-immunoprecipitation (CoIP) was performed. Proteins binding to these antibodies were detected using LC-MS/MS in DDA mode.
ORGANISM(S): Fagus sylvatica 
2026-06-08 | PXD060631 | Pride
Co- immunoprecipitation (coip) Antimicrobial peptides Fagus sylvatica 
UnknownNo evidence for interference of h&e staining in DNA testing: usefulness of DNA extraction from H&E-stained archival tissue sections.
Not available
S-EPMC3383644 | biostudies-literature
GenomicsETS Family Transcriptional Regulators Drive Chromatin Dynamics and Malignancy in Squamous Cell Carcinomas (ChIP-Seq I)
After characterizing super-enhancer-associated chromatin dynamics accompanied by malignant progression of skin stem cells, we show that ETS family members auto-regulate themselves and a cohort of cancer-associated super-enhancer transcription factors which together are essential for tumor maintenanc...
ORGANISM(S): Mus musculus 
2015-11-22 | E-GEOD-72145 | biostudies-arrayexpress
UnknownPioglitazone, vitamin E, or placebo for nonalcoholic steatohepatitis.
Not available
S-EPMC2928471 | biostudies-literature
UnknownDesmoglein 2 can undergo Ca2+-dependent interactions with both desmosomal and classical cadherins including E-cadherin and N-cadherin.
Not available
S-EPMC9034291 | biostudies-literature
UnknownPolymorphism of the flap endonuclease 1 gene in keratoconus and Fuchs endothelial corneal dystrophy.
Not available
S-EPMC4159882 | biostudies-literature
TranscriptomicsGlobal analysis of the Staphylococcus aureus response to mupirocin
In the present study we analyzed the response of S. aureus to mupirocin, the drug of choice for nasal decolonization of S. aureus. Mupirocin selectively inhibits the bacterial isoleucyl-tRNA synthetase (IleRSs) leading to the accumulation of uncharged isoleucyl-tRNA and hence (p)ppGpp. The latter is...
ORGANISM(S): Staphylococcus aureus 
2012-01-23 | E-GEOD-30743 | biostudies-arrayexpress
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