Gao Xu X - OmicsDI

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Unknown (6888)
Proteomics (197)
Metabolomics (31)
Transcriptomics (20)
Genomics (6)
Other (2)

Organisms

Andropogon gerardi (111)
Bacteria (111)
Canis lupus familiaris (111)
Cnidaria (111)
Cricetulus griseus (111)
Eukaryota (111)
Fasciola (111)
Hepatitis B virus (111)
Human betaherpesvirus 5 (111)
Madurella mycetomatis (111)
Mesocricetus auratus (111)
Homo sapiens (65)
Mus musculus (29)
Arabidopsis thaliana (2)
Macaca fascicularis fascicularis (2)
Oryctolagus cuniculus (2)
Penicillium oxalicum (1)
Oryza sativa (1)
Saccharomyces cerevisiae (1)
Aspergillus niger (1)
Bos taurus (1)
Candida albicans (1)
Danio rerio (1)
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 (1)
Rheum palmatum (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Spodoptera frugiperda (1)
Takifugu obscurus (1)
Trichuris sp. ex Homo sapiens JP-2011 (1)
uncultivated soil bacterium (1)

Repository

pride (111)
iProX (78)
MetaboLights (29)
biostudies-arrayexpress (25)
MassIVE (5)
GNPS (2)
GPMDB (2)
PeptideAtlas (2)
EGA (1)
PAXDB (1)

Tissue

Cell culture (29)
Epithelial cell (14)
Testis (8)
Brain (5)
Blood cell (3)
Blood plasma (3)
Bone marrow (3)
Cell suspension culture (3)
Colon (3)
Leaf (3)
Liver (3)
Macrophage (3)
Permanent cell line cell (3)
Stem cell (3)
T cell (3)
Male Reproductive System (2)
Blood platelet (2)
Embryo (2)
Embryonic stem cell (2)
Gastric adenocarcinoma cell (2)
Heart (2)
Kidney (2)
Lung (2)
Seedling (2)
Spleen (2)
Whole body (2)
B cell (1)
B-cell lymphoma cell (1)
Bark (1)
Blood (1)

Disease

Colon cancer (6)
Acute leukemia (3)
Breast cancer (3)
Cervix carcinoma (3)
Not Available (2)
Brain cancer (2)
Cardiovascular system disease (2)
Disease free (2)
Liver cancer (2)
Lymphoma (2)
Primary immunodeficiency disease (2)
Stomach cancer (2)
Brain glioblastoma multiforme (1)
Chronic myeloid leukemia (1)
Endocervical adenocarcinoma (1)
Endometrial Endometrioid Adenocarcinoma (1)
Esophageal cancer (1)
Gastric adenocarcinoma (1)
Kidney cancer (1)
Lung cancer (1)
Malignant neoplasm of ovary (1)
Non-alcoholic steatohepatitis (1)
Pancreas adenocarcinoma (1)
Polycystic Kidney (1)
Prostate adenocarcinoma (1)
Prostate cancer (1)
Thyroid cancer (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (111)
Shotgun proteomics (42)
Mass spectrometry (28)
Bottom-up proteomics (16)
Data-dependent acquisition (15)
Gel-based experiment (13)
Affinity purification coupled with mass spectrometry proteomics (10)
Top-down proteomics (8)
SWATH MS (5)
Data-independent acquisition (4)
Proteogenomics (3)
SRM/MRM (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Mass spectrometry assay (1)
Glycoproteomics (1)
MSE (1)
Metaproteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (15)
Liquid Chromatography MS - negative - reverse phase (14)
Liquid Chromatography MS - negative - hilic (4)
Liquid Chromatography MS - positive - hilic (4)
Q Exactive HF (2)
TripleTOF 6600 (2)
Instrument (2)
6540 Q-TOF LC/MS (Agilent) (2)
Gas Chromatography MS - positive (2)
LTQ Orbitrap Velos (2)
Illumina HiSeq 1000 (1)
LTQ Orbitrap (1)
Orbitrap Eclipse (1)
Q Exactive (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Xevo QTof MS (Waters) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2025 (35)
2022 (29)
2020 (22)
2023 (21)
2024 (20)
2026 (19)
2021 (15)
2019 (13)
2015 (6)
2014 (6)
2017 (6)
2012 (5)
2011 (5)
2018 (5)
2016 (5)
2013 (4)
2009 (1)
2008 (1)

UNIPROT ID/AC

14331_SOLTU (1)
14332_SOLTU (1)
14335_SOLTU (1)
4113.PGSC0003DMT400001418 (1)
4113.PGSC0003DMT400002078 (1)
4113.PGSC0003DMT400003947 (1)
4113.PGSC0003DMT400005135 (1)
4113.PGSC0003DMT400005136 (1)
4113.PGSC0003DMT400005427 (1)
4113.PGSC0003DMT400009647 (1)
4113.PGSC0003DMT400009751 (1)
4113.PGSC0003DMT400013958 (1)
4113.PGSC0003DMT400015957 (1)
4113.PGSC0003DMT400016201 (1)
4113.PGSC0003DMT400022438 (1)
4113.PGSC0003DMT400027147 (1)
4113.PGSC0003DMT400027379 (1)
4113.PGSC0003DMT400029003 (1)
4113.PGSC0003DMT400031900 (1)
4113.PGSC0003DMT400034164 (1)
4113.PGSC0003DMT400034190 (1)
4113.PGSC0003DMT400035006 (1)
4113.PGSC0003DMT400035007 (1)
4113.PGSC0003DMT400038109 (1)
4113.PGSC0003DMT400040121 (1)
4113.PGSC0003DMT400040171 (1)
4113.PGSC0003DMT400040182 (1)
4113.PGSC0003DMT400041662 (1)
4113.PGSC0003DMT400043254 (1)
4113.PGSC0003DMT400045338 (1)

ENSEMBL ID

ENSG00000170477 (2)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000147251 (1)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16704 (12)
CHEBI:17154 (11)
CHEBI:37024 (11)
CHEBI:16708 (11)
CHEBI:17596 (11)
CHEBI:17368 (11)
CHEBI:30769 (11)
CHEBI:7916 (10)
CHEBI:46961 (10)
CHEBI:15354 (10)
CHEBI:17295 (10)
CHEBI:16040 (9)
CHEBI:18211 (9)
CHEBI:17053 (9)
CHEBI:16335 (9)
CHEBI:17568 (9)
CHEBI:16750 (9)
CHEBI:16737 (9)
CHEBI:17351 (9)
CHEBI:30832 (8)
CHEBI:16856 (8)
CHEBI:48131 (8)
CHEBI:16393 (8)
CHEBI:35581 (8)
CHEBI:25094 (8)
CHEBI:116314 (8)
CHEBI:16027 (8)
CHEBI:15971 (8)
CHEBI:16015 (8)
CHEBI:17509 (8)

Metabolite Name

Adenosine (8)
Uracil (8)
Citric acid (7)
Adenine (7)
Uridine (7)
L-Tryptophan (6)
L-Phenylalanine (6)
Inosine (6)
L-Proline (5)
L-Arginine (5)
Palmitic acid (5)
Linoleic acid (5)
Guanosine (5)
Sucrose (5)
Creatinine (5)
Ethyl glucuronide (4)
Betaine (4)
Sphingosine (4)
1-Aminocyclopropanecarboxylic acid (4)
Benzaldehyde (4)
Melibiose (4)
Phytosphingosine (4)
L-Lysine (4)
Pyroglutamic acid (4)
Niacinamide (4)
Pelargonic acid (4)
Kynurenic acid (4)
Gluconic acid (4)
Indole (4)
Choline (4)

Modification

15.994915 (1)
57.021464 (1)

Study type

RNA-seq of coding RNA (6)
Transcription profiling by array (5)
ChIP-chip by tiling array (4)
Comparative genomic hybridization by array (3)
ChIP-seq (3)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by tiling array (1)
RNA-seq of total RNA (1)

Release Date

2025 (1121)
2022 (1000)
2023 (883)
2024 (882)
2021 (740)
2020 (579)
2019 (348)
2018 (290)
2017 (239)
2016 (179)
2026 (162)
2015 (153)
2014 (113)
2013 (72)
2012 (72)
2011 (40)
2009 (15)
2010 (13)
2008 (4)
2005 (4)
2007 (1)
2006 (1)
2004 (1)
2002 (1)

Lab affiliation

Department of Radiation and Medical Oncology, Zhongnan Hospital of Wuhan University (2)
ETH Zurich (2)
Jiangnan University (2)
Key Laboratory for Experimental Teratology of the Ministry of Education, Advanced Medical Research Institute, Qilu Hospital, Cheeloo College of Medicine, Shandong University (2)
Shanghai Tenth People's Hospital, Tongji University School of Medicine (2)
westlake.edu.cn (2)
BGI-Shenzhen (1)
BGI-shenzhen (1)
Beijing Key Laboratory for Radiobiology, Beijing Institute of Radiation Medicine, Beijing 100850, P.R. China (1)
Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， Beijing 102206 P.R. China. (1)
Beijing proteome research center, Beijing, China (1)
Carnegie Institution at Stanford (1)
Carnegie Mass Spec Facility (1)
Case Western Reserve University (1)
Chemistry & Biochemistry (1)
China Agricultural University (1)
China National GenBank,BGI-Shenzhen,Shenzhen 518120,China (1)
City of Hope medical centre, Diabetes Institute (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences (1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland Faculty of Science, University of Zurich, Switzerland (1)
Department of Biotherapy, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, and West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu 610041, P.R. China (1)
Department of Cardiology, Songjiang Hospital Affliated to Shanghai Jiaotong University School of Medicine (1)
Department of Chemistry, SUSTech (1)
Department of Chemistry, The University of Hong Kong (1)
Department of Clinical Laboratory, Sun Yat-Sen University Cancer Center, Guangzhou 510060, P. R. China. (1)
Department of Endocrinology and Metabolism, The First Affiliated Hospital of Nanjing Medical University. (1)
Department of Gynecological Oncology National Clinical Research Centre for Obstetrics and Gynecology Cancer Biology Research Centre (Key Laboratory of the Ministry of Education) Tongji Hospital, Tongji Medical College Huazhong University of Science and Technology (1)
Department of Gynecological Oncology, Tongji Hospital, Tongji Medical College,Huazhong University of Science and Technology (1)
Department of Hematology, The Affiliated Cancer Hospital of Zhengzhou University & Henan Cancer Hospital, Zhengzhou, China (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University; Key Laboratory of Carcinogenesis and Cancer Invasion of Ministry of Education, Key Laboratory of Medical Epigenetics and Metabolism, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China (1)

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Transcriptomic and metabolomic analyses reveal the differential accumulation of phenylpropanoids and terpenoids in hemp autotetraploid and its diploid progenitor

Background

Cannabis sativa, a dioecious plant that has been cultivated worldwide for thousands of years, is known for its secondary metabolites, especially cannabinoids, which possess several medicinal effects. In this study, we investigated the autopolyploidization effects on the biosynthes...

2023-09-21 | MTBLS6032 | MetaboLights

Quantitative Evaluation of the Function of the Sensory Nerve Fibers of the Palate in Patients With Obstructive Sleep Apnea.

Not available

S-EPMC6760391 | biostudies-literature

CN-CHPP 2015 Testis Project - Tissue-Based Proteogenomics Reveals that Human Testis Endows Plentiful Missing Proteins

The testis tissue-based trans-omics was a feasible approach to find more missing proteins (MPs) because it was reported higher gene expression found in testis tissues. Three testis tissues and two protein separation strategies were selected to quantitatively evaluate gene expression abundance at the...

ORGANISM(S): Homo sapiens (Human)

2015-11-03 | PXD002179 | Pride

Health outcomes of fruit juice and fruity beverage: a comparative analysis of gut microbiota and metabolomics in rats (Lipidomics assay)

BACKGROUND: Diet is foods and drinks regularly consumed, and its regulation is complicated. It is necessary to obtain a practical understanding of which foods and drinks contribute to health and well-being and which are insalubrious. Clear evidence shows that a high intake of fru...

2022-08-24 | MTBLS4108 | MetaboLights

Unexpected bowing band evolution in an all-inorganic CsSn_1-x Pb _x Br₃ perovskite.

Not available

S-EPMC9055386 | biostudies-literature

Role of Rbp1 in the acquired chill-light tolerance of cyanobacteria.

Not available

S-EPMC3133111 | biostudies-literature

Proteomic analysis of Masson pine with high resistance to pine wood nematode

Pine wilt disease is a worldwide dangerous pine disease. We used Masson pine (Pinus massoniana) clones, selected through traditional breeding and testing for 20 years, with high resistance to study the molecular mechanism of resistance to pine wood nematode (PWN, Bursaphelenchus xylophilus). A total...

ORGANISM(S): Pinus massoniana var. massoniana

2022-10-13 | PXD030664 | Pride

Masson pine pine wood nematode resistant proteins proteomic analysis

The complete chloroplast genome sequence of Primula medogensis (Primulaceae) and its phylogeny.

Not available

S-EPMC11485687 | biostudies-literature

Statin initiation and risk of incident kidney disease in patients with diabetes.

Not available

S-EPMC10228577 | biostudies-literature

Multienergy x-ray imaging enabled by unipolar perovskite detector for intelligent substance identification.

Not available

S-EPMC12758516 | biostudies-literature

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7144 Results

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Organisms

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Tissue

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ENSEMBL ID

CHEBI ID

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Background

OmicsDI is part of the ELIXIR infrastructure

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