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ProteomicsGel-free/label-free proteomic, biochemical and photosynthetic anaysis of cowpea resistance against Cowpea severe mosaic virus
In this present work, photosynthetic and biochemical parameters in conjunction with gel-free/label-free proteomic analysis were assessed in a resistant cowpea genotype challenged with CPSMV and compared with the corresponding data of the mock-inoculated control as an attempt to find out some clues t...
ORGANISM(S): Vigna unguiculata 
2024-09-12 | PXD005906 | Pride
Cowpea Incompatible interaction Physiology Biochemistry Gel-free/label-free proteomic 
Genomics96 mRRBS libraries: Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA
Sequencing based approaches have led to new insights about DNA methylation. While many different techniques for genome-scale mapping of DNA methylation have been employed, throughput has been a key limitation for most. To further facilitate the mapping of DNA methylation, we describe a protocol for ...
ORGANISM(S): Homo sapiens 
2012-08-29 | E-GEOD-40429 | biostudies-arrayexpress
ProteomicsProtein Metabolism Underlying Heat Tolerance in Contrasting Creeping Bentgass Lines: Insights From Gel-Free Proteomics
One of the major disfunctions that occurs in heat-stressed plants is enhanced protein damage and a consequent decline in cellular protein content. Creeping bentgrass (Agrositis stolonifera L.) is an economically important perennial grass species which is largely used on high value turf areas but exp...
ORGANISM(S): Agrostis stolonifera 
2025-10-20 | PXD060809 | Pride
Heat stress  creeping bentgrass  polyubiquitin-omics  gel-free proteomics  proteostasis 
ProteomicsGel based and gel-free search for plasma membrane proteins in chickpea (Cicer arietinum L.) augments the comprehensive data sets of membrane protein repertoire
Plasma membrane (PM) encompasses total cellular contents, serves as a living barrier regulates all cellular exchanges in a spatiotemporal fashion. Most of the essential tasks of PMs including molecular transport, cell-cell interaction and signal transduction are carried out by their proteinaceous co...
ORGANISM(S): Cicer arietinum (Chickpea) (Garbanzo) 
2024-12-05 | PXD003697 | Pride
Shotgun proteomics Plant proteomics High resolution mass spectrometry 
ProteomicsGel-free/label-free proteomic analysis of wheat root in stress tolerant varieties under iron nanoparticles exposure
Iron nanoparticles (Fe NPs) have stimulatory effects on the germination ratio and plant growth of wheat. To elucidate the effects of Fe NPs on shoot of drought tolerant Pakistan-13 and salt tolerant NARC-11, a gel-free/label-free proteomic technique was used.
ORGANISM(S): Triticum aestivum (Wheat) 
2016-08-19 | PXD004277 | Pride
Iron nanoparticles Abiotic stress tolerance Proteomics Wheat Shoot 
ProteomicsGel-Free/Label-Free Proteomic Analysis Uncovers the Roles of Endoplasmic Reticulum of Soybean Root Tip under Flooding and Drought Stresses
As a stresses sensitive crop, this study will give some clues to enhance soybean tolerance of flooding and drought stresses. To uncover the response mechanisms occurring in the ER triggered by flooding and drought, ER proteomics was performed using gel-free/label-free proteomic approach. Besides, gl...
ORGANISM(S): Glycine max 
2017-04-03 | PXD003397 | Pride
Proteomics Drought Endoplasmic reticulum Root tip Soybean Flooding 
ProteomicsAn alliance of gel-based and gel-free proteomic techniques displays substantial insight into the proteome of a virulent and an attenuated Histomonas meleagridis strain
The current work aimed to detect and identify significant differentially expressed proteins between a virulent and an attenuated Histomonas meleagridis strain which were in vitro co-cultivated with Escherichia coli DH5alpha. This was done by applying 2D-DIGE and sequential window acquisition of all ...
ORGANISM(S): Histomonas meleagridis 
2018-12-10 | PXD009316 | Pride
Attenuation. Protozoa Swath ms Histomonas meleagridis Virulence factors Comparative proteomic analysis 2d-dige Maldi-tof/tof Lc-ms/ms 
ProteomicsAn alliance of gel-based and gel-free proteomic techniques displays substantial insight into the proteome of a virulent and an attenuated Histomonas meleagridis strain
The current work aimed to detect and identify significant differentially expressed proteins between a virulent and an attenuated Histomonas meleagridis strain which was in vitro co-cultivated with Escherichia coli DH5alpha. This was done by applying 2D-DIGE and sequential window acquisition of all t...
ORGANISM(S): Histomonas meleagridis 
2018-11-22 | PXD009332 | Pride
Attenuation. Protozoa Swath ms Histomonas meleagridis Virulence factors Comparative proteomic analysis 2d-dige Maldi-tof/tof Lc-ms/ms 
ProteomicsAn alliance of gel-based and gel-free proteomic techniques displays substantial insight into the proteome of a virulent and an attenuated Histomonas meleagridis strain
The current work aimed to detect and identify significantly differentially expressed proteins between a virulent and an attenuated Histomonas meleagridis strain which were in vitro co-cultivated with Escherichia coli DH5alpha. This was done by applying 2D-DIGE and sequential window acquisition of al...
ORGANISM(S): Histomonas meleagridis 
2018-11-21 | PXD009319 | Pride
Attenuation. Protozoa Swath ms Histomonas meleagridis Virulence factors Comparative proteomic analysis 2d-dige Maldi-tof/tof Lc-ms/ms 
Methylation profiling96 mRRBS libraries: Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA
Sequencing based approaches have led to new insights about DNA methylation. While many different techniques for genome-scale mapping of DNA methylation have been employed, throughput has been a key limitation for most. To further facilitate the mapping of DNA methylation, we describe a protocol for ...
ORGANISM(S): Homo sapiens 
2012-08-29 | GSE40429 | GEO
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