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TranscriptomicsTranscription profiling of bovine early embryonic development in vivo using a bovine developmental array
Transcript abundance profiling analysis of bovine early embryonic development in vivo using a bovine developmental array.
ORGANISM(S): Bos taurus 
2009-06-01 | E-MEXP-2075 | biostudies-arrayexpress
ProteomicsSuccessive protein extraction using hydroxylamine to increase the depth of proteome coverage in fresh, forensic and archaeological bones
Proteomics is continually being applied to a wider range of applications, now including the analysis of archaeological samples and anatomical specimens, in particular, collagen-containing tissues such as bones and teeth. Here we present the application of a chemi-cal digestion-based proteomics sampl...
ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human) 
2024-03-28 | PXD046969 | Pride
Hydroxylamine Collagen Archaeology Chemical digestion 
ProteomicsEvaluation of protein purification techniques and effects of storage duration on LC-MS/MS analysis of archived FFPE human CRC tissues
To elucidate cancer pathogenesis and its mechanisms at the molecular level, the collecting and characterisation of large individual patient tissue cohorts are required. Since most pathology institutes routinely preserve biopsy tissues by standardised methods of formalin fixation and paraffin embedme...
ORGANISM(S): Homo sapiens (Human) 
2021-04-06 | PXD017198 | Pride
Human Label-free shotgun mass spectrometry Ffpe Colon cancer Protein purification Archival storage Colorectal cancer 
UnknownA comprehensive benchmarking of the AlphaFold3 for predicting biomacromolecules and their interactions.
Not available
S-EPMC12661943 | biostudies-literature
UnknownCharacterization of pre-insertion loci of de novo L1 insertions.
Not available
S-EPMC1850991 | biostudies-literature
TranscriptomicsComparative genomic hybridization of variably invasive strains of Neisseria meningitidis
Genomic comparison of more and less invasive strains of Neisseria meningitidis
ORGANISM(S): Neisseria meningitidis 
2005-05-30 | E-MEXP-343 | biostudies-arrayexpress
ProteomicsSpecies identification of ivory and bone museum objects using minimally invasive proteomics
Ivory is a highly prized material in many cultures since it can be carved into intricated designs and have a highly polished surface. Due to its popularity, the animals from which ivory can be sourced have started to come under threat. Identification of the ivory species is not only important for co...
ORGANISM(S): Bos taurus (Bovine) Physeter catodon Hippopotamus amphibius (Hippopotamus) Loxodonta africana (African elephant) Cervus elaphus hippelaphus Loxodonta cyclotis Elephas maximus indicus 
2024-02-05 | PXD042536 | Pride
Hippopotamus Ivory Elephant Minimally invasive 
UnknownMolecular characterization of the translocation breakpoints in the Down syndrome mouse model Ts65Dn.
Not available
S-EPMC3505986 | biostudies-literature
TranscriptomicsTranscription forms and remodels supercoiling domains unfolding large scale chromatin structures [Illumina transcription]
This study was designed to investigate DNA supercoiling across the human genome and to understand how supercoiling domains impact on higher levels of genome organisation. DNA supercoiling is an inherent consequence of twisting DNA and is critical for regulating gene expression and DNA replication. H...
ORGANISM(S): Homo sapiens 
2013-02-17 | E-GEOD-43449 | biostudies-arrayexpress
TranscriptomicsTranscription forms and remodels supercoiling domains unfolding large scale chromatin structures [NimbleGen ChIP-chip]
This study was designed to investigate DNA supercoiling across the human genome and to understand how supercoiling domains impact on higher levels of genome organisation. DNA supercoiling is an inherent consequence of twisting DNA and is critical for regulating gene expression and DNA replication. H...
ORGANISM(S): Homo sapiens 
2013-02-17 | E-GEOD-43448 | biostudies-arrayexpress
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