Hydroxylamine - OmicsDI

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Proteomics (1633)
Unknown (518)
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These mice have a relatively normal first wave of spermatogenesis but never become fertile. Older animals show increased apoptosis of germ cells, increasing in severity as germ cell stage advances. (1)
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Technology Type

Mass Spectrometry (1678)
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CHEBI ID

CHEBI:62890 (3)
CHEBI:139151 (3)
CHEBI:85106 (3)
CHEBI:40356 (3)
CHEBI:67138 (3)
CHEBI:64076 (3)
CHEBI:64074 (3)
CHEBI:64077 (3)
CHEBI:64075 (3)
CHEBI:70731 (3)
CHEBI:13388 (3)
CHEBI:35098 (3)
CHEBI:34773 (3)
CHEBI:34606 (3)
CHEBI:74004 (3)
CHEBI:74007 (3)
CHEBI:134176 (3)
CHEBI:74853 (3)
CHEBI:71517 (3)
CHEBI:58838 (3)
CHEBI:58837 (3)
CHEBI:57677 (3)
CHEBI:60464 (3)
CHEBI:65078 (3)
CHEBI:48595 (3)
CHEBI:73682 (3)
CHEBI:27973 (3)
CHEBI:131350 (3)
CHEBI:45506 (3)
CHEBI:58556 (3)

Metabolite Name

Hydroxylamine (23)
Glycine (22)
Ornithine (20)
Ethanolamine (19)
Glycolic acid (16)
Fumaric acid (16)
Hydroxylamine (15)
L-threonine (15)
Thymine (15)
Putrescine (15)
Benzoic acid (15)
Succinic acid (15)
Citric acid (15)
Stearic acid (15)
Glycerol (15)
Pyruvic acid (14)
Succinic acid (14)
L-glutamic acid (14)
Palmitic acid (14)
Uracil (14)
L-proline (13)
Sucrose (13)
Fumaric acid (13)
Myo-inositol (13)
L-valine (13)
Glyceric acid (13)
Lysine (13)
Glycine (13)
L-alanine (12)
Stearic acid (12)

First Public Date

2014 (15)
2026 (7)
2025 (7)
2024 (7)
2013 (4)
2021 (3)
2023 (2)
2022 (2)
2019 (2)
2018 (2)
2016 (1)

Modelling Approach

Constraint-based model (3)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (68)
The University of Melbourne (17)
Harvard Medical School (12)
Karolinska Institutet, Stockholm, Sweden (10)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (9)
Department of Cell Biology, Harvard Medical School, Boston MA 02115 USA (7)
Cellzome (6)
Cambridge Institute for Medical Research, University of Cambridge (6)
Department of Cell Biology, Harvard Medical School, Boston, MA 02115 USA (5)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden (5)
CRUK Scotland Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (5)
Centre for Cancer Cell & Molecular Biology, Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London EC1M 6BQ, UK. (5)
The University of Sydney (5)
Karolinska Institutet (5)
Department of Cell Biology, Harvard Medical School, Boston, MA, USA (5)
Institute for Research in Immunology and Cancer, Department of Biochemistry, Department of Chemistry, Université de Montréal, Québec, Canada H3T 1J4 (5)
Lineberger Comprehensive Cancer Center at UNC Chapel Hill (4)
The Key Laboratory of Molecular Biology of Infectious Diseases designated by the Chinese Ministry of Education, Chongqing Medical University, Chongqing, China. (4)
Whitehead Institute for Biomedical Research and Massachusetts Institute of Technology (4)
Molecular Genetics, RPTU Kaiserslautern (4)
Finley and Gygi lab Cell Biology Department Harvard Medical School US (4)
Principal Investigator Centre for Targeted Protein Degradation, School of Life Sciences (4)
VetMedZg Laboratory,Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia Institute of Biodiversity, Animal Health & Comparative Medicine, College of Medicine, Veterinary Medicine and Life Sciences, University of Glasgow, Glasgow, UK (4)
Zhejiang University, China (4)
Department of Chemistry and Chemical Biology, Harvard University (4)
The Scripps Research Institute (4)
Department of Cell Biology, Harvard Medical School, Boston MA (4)
Whitehead Institute for Biomedical Research and Department of Biology, Massachusetts Institute of Biology, Cambridge, MA, USA (4)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX, USA. (3)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02215, USA (3)

IsPrivate

False (3)

Submitter Keywords

FROG (3)

Classification

bacteria (3)
viruses (1)

Modification

-17.026549 (4)
42.010565 (4)
15.994915 (4)
N6 (4)
58.005479 (2)
N6-dimethyl-L-lysine (2)
+3amu) (2)
4-tetrahydrothiazine-3-carboxylic acid (2)
47.036105 (1)
32.056407 (1)
45.029395 (1)
56.026215 (1)
59.036279 (1)
4'-dihydroxyphenylalanine (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
-18.010565 (1)
57.021464 (1)

Study type

Transcription profiling by array (419)
ChIP-chip by tiling array (13)
Unknown experiment type (11)
RNA-seq of coding RNA from single cells (8)
Transcription profiling by tiling array (7)
ChIP-chip by array (7)
Comparative genomic hybridization by array (7)
MicroRNA profiling by array (5)
RNAi profiling by array (3)
Other (3)
RNA-seq of coding RNA (3)
Bisulfite-seq (1)
Single nucleus RNA sequencing (1)
ChIP-seq (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2010 (117)
2013 (69)
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2000 (2)
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Successive protein extraction using hydroxylamine to increase the depth of proteome coverage in fresh, forensic and archaeological bones

Proteomics is continually being applied to a wider range of applications, now including the analysis of archaeological samples and anatomical specimens, in particular, collagen-containing tissues such as bones and teeth. Here we present the application of a chemi-cal digestion-based proteomics sampl...

ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human)

2024-03-28 | PXD046969 | Pride

Hydroxylamine Chemical Digestion for Insoluble Extracellular Matrix Characterization

The extracellular matrix (ECM) is readily enriched by decellularizing tissues with non-denaturing detergents to solubilize and deplete the vast majority of cellular components. This approach has been used extensively to generate ECM scaffolds for regenerative medicine technologies and in 3D cell cul...

ORGANISM(S): Mus musculus (Mouse)

2017-10-20 | PXD006428 | Pride

Proteomics Mass spectrometry Lc-srm Matrisome Tissue extraction Collagen Chemical digestion Extracellular matrix

Uni TU_NP_Library_treated with hydroxylamine

Data dependent analysis of a University of Tuebingen NPs library treated with hydroxylamine

ORGANISM(S): Not Applicable

2023-11-27 | MSV000093506 | MassIVE

Effect of hydroxylamine

PRJNA939019 | ENA

Enzymatic Nitrogen Incorporation Using Hydroxylamine.

Not available

S-EPMC10560455 | biostudies-literature