Gonzalez M M - OmicsDI

Show results for

Unknown (18706)
Proteomics (254)
Transcriptomics (234)
Genomics (55)
Metabolomics (52)
Models (8)
Genomic (3)
Other (2)

Organisms

Homo sapiens (136)
Mus musculus (51)
Arabidopsis thaliana (27)
Saccharomyces cerevisiae (10)
Rattus norvegicus (7)
Drosophila melanogaster (5)
Schizosaccharomyces pombe (4)
Helicobacter pylori (4)
Cucumis melo (3)
Pseudomonas putida (3)
Caenorhabditis elegans (3)
Gallus gallus (3)
Blattabacterium sp. (2)
Chlamydomonas reinhardtii (2)
Glycine max (2)
Sus scrofa (2)
Natronomonas pharaonis (1)
Staphylococcus aureus subsp. aureus N315 (1)
Melon necrotic spot virus (1)
Salmonella enterica (1)
Yarrowia lipolytica (1)
Macaca mulatta (1)
Drosophila simulans (1)
Halobacterium salinarum (1)
Mycobacterium tuberculosis (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Oryctolagus cuniculus (1)
Pseudomonas aeruginosa UCBPP-PA14 (1)
Bos taurus (1)
Enterococcus faecalis (1)

Organisms

Homo sapiens (5)
Marinobacterium profundum (1)
Pseudomonas aeruginosa UCBPP-PA14 (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (245)
pride (218)
MetaboLights (37)
MassIVE (31)
EGA (25)
GNPS (15)
ENA (10)
geo (9)
BioModels (8)
PAXDB (5)
dbGaP (3)
jPOST (1)
PanoramaPublic (1)

Tissue

Cell culture (38)
T cell (26)
Brain (23)
Primary cell (19)
Spleen (14)
Blood (10)
Lymph node (9)
Lung (8)
Permanent cell line cell (8)
Epithelial cell (8)
Blood plasma (6)
Fibroblast (6)
Liver (6)
Plant cell (5)
Colon (5)
Macrophage (4)
Heart (4)
Leaf (4)
Blood cell (4)
Embryonic stem cell (3)
Cerebrospinal fluid (3)
Bone marrow (3)
Skeletal muscle (3)
Embryo (3)
HeLa cell (3)
Hepatocyte (3)
B cell (3)
Saliva (3)
Thymocyte (2)
Endothelial cell (2)

Disease

Colon cancer (4)
Parkinson's disease (3)
Disease free (3)
Normal (2)
Alzheimer's disease (2)
Chronic lymphocytic leukemia (2)
Neurodevelopmental abnormality (2)
Brain glioblastoma multiforme (2)
Prostate adenocarcinoma (2)
Lymphoma (2)
Chronic myeloid leukemia (2)
COVID-19 (2)
Breast cancer (2)
Androgen-dependent prostate cancer (1)
Acute erythroid leukemia (1)
Upper respiratory tract disease (1)
Developmental and epileptic encephalopathy 2 (1)
Asbestos-related lung carcinoma (1)
Female infertility of uterine origin (1)
Early infantile epileptic encephalopathy (1)
Epithelioid sarcoma (1)
Rheumatoid arthritis (1)
Hepatitis (1)
Lyme disease (1)
Esophagus adenocarcinoma (1)
Uveal melanoma (1)
Castration-resistant prostate carcinoma (1)
Bone osteosarcoma (1)
Cerebrovascular disease (1)
Polycystic liver disease (1)

Technology Type

Mass Spectrometry (218)
Shotgun proteomics (93)
Bottom-up proteomics (47)
Affinity purification coupled with mass spectrometry proteomics (43)
Mass spectrometry (31)
SWATH MS (25)
Data-dependent acquisition (24)
Data-independent acquisition (16)
Gel-based experiment (9)
Chemical cross-linking coupled with mass spectrometry proteomics (6)
All-ion fragmentation (5)
Mass spectrometry assay (4)
Top-down proteomics (4)
NMR spectroscopy (2)
Affinity proteomics (2)
HDMSE (2)
ILLUMINA, Illumina Genome Analyzer IIx, Illumina HiSeq 2500 (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Complete Genomics (COMPLETE_GENOMICS) (1)
Illumina Omni 2.5, Illiumina Omni 2.5 (1)
MSE (1)
SRM/MRM (1)

Instrument Platform

Illumina HiSeq 2000 (15)
Illumina NovaSeq 6000 (11)
Q Exactive (11)
Agilent 6890-5973 (GC/MS) (7)
NextSeq 500 (4)
454 GS FLX+ (3)
Illumina HiSeq 2500 (3)
Illumina HiSeq 4000 (3)
Illumina MiSeq (2)
6520A Quadrupole Time-of-Flight LC/MS (2)
Xevo G2-XS QTof (2)
SYNAPT G2-Si (2)
TSQ Altis (2)
Xevo G2 XS Tof (2)
MaXis 4G (2)
Microarray scanner system (1)
10X Genomics Chromium (1)
MoFlo XPD (Beckman Coulter, Fullerton, CA, USA) flow cytometer (1)
BD FACSARIA III (1)
Fluidigm C1 (1)
Illumina MouseWG-6 v2 Expression BeadChip (1)
GenePix Personal 4100A [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
NA (1)
DNBSEQ-G400 (1)
6530B Q-TOF LC/MS (1)
TSQ Quantis (1)
Thermo Scientific TRACE 1310 GC-MS (1)
Agilent 7200 GC-MS QTof (1)
LTQ FT (1)

Publication Date

2023 (51)
2022 (42)
2025 (39)
2012 (37)
2021 (36)
2016 (35)
2014 (35)
2024 (33)
2013 (32)
2020 (30)
2026 (29)
2018 (24)
2019 (23)
2015 (23)
2011 (23)
2010 (22)
2008 (13)
2017 (12)
2007 (12)
2009 (9)
2005 (6)
2006 (1)

UNIPROT ID/AC

CSEC_STRCO (3)
Q9RD03_STRCO (3)
Q9S2B3_STRCO (3)
Q9EX14_STRCO (3)
O86590_STRCO (3)
Q93JE5_STRCO (3)
O86748_STRCO (3)
Q9S280_STRCO (3)
Q9K3Q8_STRCO (3)
O69961_STRCO (3)
Q9FBZ3_STRCO (3)
Q9RK21_STRCO (3)
Q93IZ2_STRCO (3)
O86689_STRCO (3)
Q9L1D1_STRCO (3)
Q9RDK2_STRCO (3)
Q9KYR1_STRCO (3)
Q9KZ31_STRCO (3)
Q9S2V9_STRCO (3)
Q9RKF7_STRCO (3)
Q9FCE6_STRCO (3)
Q9ADJ5_STRCO (3)
Q93RW6_STRCO (3)
Q9XA23_STRCO (3)
Q9ZBT4_STRCO (3)
Q9K4C2_STRCO (3)
Q9L2J1_STRCO (3)
Q9RKW3_STRCO (3)
Q9KYA5_STRCO (3)
Q9KY72_STRCO (3)

CHEBI ID

CHEBI:16359 (8)
CHEBI:28865 (8)
CHEBI:28834 (6)
CHEBI:17687 (6)
CHEBI:17521 (5)
CHEBI:16755 (5)
CHEBI:16243 (5)
CHEBI:16525 (5)
CHEBI:16750 (5)
CHEBI:16610 (5)
CHEBI:15741 (5)
CHEBI:16112 (5)
CHEBI:36062 (5)
CHEBI:80774 (5)
CHEBI:15354 (5)
CHEBI:9410 (5)
CHEBI:30769 (5)
CHEBI:65751 (4)
CHEBI:520 (4)
CHEBI:16860 (4)
CHEBI:28499 (4)
CHEBI:50202 (4)
CHEBI:37998 (4)
CHEBI:36259 (4)
CHEBI:16325 (4)
CHEBI:9907 (4)
CHEBI:16856 (4)
CHEBI:16708 (4)
CHEBI:17562 (4)
CHEBI:17148 (4)

Metabolite Name

Cholic acid (4)
Uridine (4)
Tris(2-butoxyethyl) phosphate (3)
3-O-methylquercetin (3)
Quinic acid (3)
GLCA (3)
TLCA (3)
GDCA (3)
GCDCA (3)
TDCA (3)
TCDCA (3)
TUDCA (3)
GCA (3)
TCA (3)
LCA (3)
DCA (3)
CDCA (3)
UDCA (3)
CA (3)
Succinate (3)
Elaidic acid (3)
Guanosine (3)
Hypoxanthine (3)
Polymatin B (2)
Longipilin acetate (2)
Dibutyl phthalate (DBP) (2)
Lyso-PC(16:0) (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)

First Public Date

2013 (4)
2014 (3)
2019 (1)
2017 (1)
2016 (1)

Modelling Approach

Ordinary differential equation model (3)
Steady-state model (1)
Logical model (1)

Lab affiliation

Institute of Pharmacology and Structural Biology, CNRS, Toulouse, France (11)
Institute of Pharmacology and Structural Biology, CNRS, Toulouse (8)
Department of Cell Biology, Harvard Medical School, Boston MA (5)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (4)
1) Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland 2) Faculty of Science, University of Zurich, Zurich, Switzerland (4)
Novo Nordisk Center For Basic Metabolic Research, University of Copenhagen. (3)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, The Netherlands (3)
Museo Nacional de Ciencias Naturales. Dpto Biodiversidad y Biologia Evolutiva (CSIC) (2)
Program in Molecular Medicine, UMass Chan Medical School (2)
Centro de Investigaciones Biológicas Margarita Salas, CSIC, Madrid, Spain (2)
Department of Cell Biology, Harvard Medical School, Boston MA 02115 (2)
Institute of pharmacology and structural biology, CNRS, Toulouse, France (2)
Cell and Chemical Biology Leiden University Medical Center The Netherlands (2)
Foundation of Ophthalmology Investigation (1)
Division of Cell Signalling and Immunology, School of Life Sciences, University of Dundee, Dundee, UK. (1)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA (1)
Department of Molecular Biology, Cristea Lab, Princeton University, USA (1)
Breast Cancer Clinical Research Unit Centro Nacional de Investigaciones Oncológicas – CNIO Madrid, Spain. (1)
Department of Radiation Oncology, UT Southwestern Medical Center, Dallas, TX 75390, USA (1)
Hans Merensky Chair in Avocado Research, Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0028, South Africa (1)
Leibniz Institute on Aging - Fritz Lipmann Institute (FLI) (1)
Novo Nordisk Center for Basic Metabolic Research, University of Copenhagen, Denmark. (1)
University Magdeburg, Institut of Exptl. Internal Medicine, Leipzigerstr. 44, 39120 Magdeburg, Germany (1)
Chief Scientific Officer, Pelago Bioscience AB (1)
Saint Louis University (1)
Cellular and Molecular Pharmacology, UCSF, San Francisco, CA (1)
Department de biochimie et medecine moleculaire, Universite de Montreal (1)
Professor, Department of Cellular and Molecular Pharmacology (1)
Department of Cardiac Development and Remodelling, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany. (1)
Institute of Molecular Cancer Research (IMCR), University of Zürich; Zürich, CH-8057, Switzerland (1)

IsPrivate

False (8)

Model Flag

Non Kinetic (5)

Classification

bacteria (2)

Modification

15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (127)
RNA-seq of coding RNA (54)
ChIP-seq (12)
RNA-seq of non coding RNA (8)
Unknown experiment type (7)
Comparative genomic hybridization by array (6)
Methylation profiling by high throughput sequencing (5)
Genotyping by array (4)
DNA-seq (3)
Methylation profiling by array (3)
RNA-seq of coding RNA from single cells (3)
Baseline (2)
ChIP-chip by tiling array (2)
ChIP-chip by array (2)
Other (2)
High-throughput sequencing (1)
Transcription profiling by RT-PCR (1)
Spatial transcriptomics by high-throughput sequencing (1)
MicroRNA profiling by array (1)
Genotyping by high throughput sequencing (1)

Release Date

2022 (2451)
2025 (2270)
2023 (2248)
2021 (2205)
2024 (1949)
2020 (1556)
2019 (1180)
2018 (910)
2017 (745)
2016 (658)
2015 (568)
2014 (480)
2026 (362)
2013 (332)
2012 (243)
2011 (224)
2010 (168)
2009 (118)
2008 (89)
2007 (64)
2006 (35)
2005 (23)
2002 (15)
2003 (13)
2004 (12)
2000 (12)
2001 (11)
1998 (6)
1999 (4)

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A reporter Oropouche virus expressing ZsGreen from the M segment enables pathogenesis studies in mice.

Not available

S-EPMC11406970 | biostudies-literature

Molecular characterization of Escherichia coli producing extended-spectrum β-lactamase CTX-M-14 and CTX-M-28 in Mexico.

Not available

S-EPMC10920525 | biostudies-literature

Single and double activation of acetone by isolobal B[triple bond, length as m-dash]N and B[triple bond, length as m-dash]B triple bonds.

Not available

S-EPMC6009441 | biostudies-literature

Consensus Pharmacophore Strategy For Identifying Novel SARS-Cov-2 M^pro Inhibitors from Large Chemical Libraries.

Not available

S-EPMC10966741 | biostudies-literature

Phytochemical Profiles and Cytotoxic Activity of Bursera fagaroides (Kunth) Engl. Leaves and Its Callus Culture

Not available

S-EPMC11207444 | biostudies-literature

Mixed Matrix Membranes Based on Fluoropolymers with m- and p-Terphenyl Fragments for Gas Separation Applications.

Not available

S-EPMC7905937 | biostudies-literature

Single cell RNA-seq of isolated human foetal L/M-opsin cone photoreceptor populations labelled using the AAV2/9.pR2.1.GFP reporter

Human cone photoreceptors represent a rare cell population of the human retina and are largely outnumbered by other retinal cell types. Despite their rarity, cone photoreceptors are critical for optimal daylight vision and their loss has the greatest impact on sight during the progression of retinal...

ORGANISM(S): Homo sapiens

2018-04-20 | E-MTAB-6058 | biostudies-arrayexpress

In-vivo Raman microspectroscopy reveals differential nitrate concentration in different developmental zones in Arabidopsis roots.

Not available

S-EPMC11657419 | biostudies-literature

Reproductive biology and mating system estimates of two Andean melocacti, Melocactus schatzlii and M. andinus (Cactaceae).

Not available

S-EPMC2802972 | biostudies-literature

Comparison of Three Expanded-Spectrum Cephalosporin Hydrolysis Assays and the NG-Test CTX-M Multi Assay That Detects All CTX-M-Like Enzymes.

Not available

S-EPMC8775164 | biostudies-literature