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TranscriptomicsIllumina Infinium HumanMethylationEPIC DNA methylation microarray of human donor whole-blood from patients with and without Age-related Macular Degeneration
DNA methylation microarray analysis was performed on human donor whole blood samples from patients with and without AMD. A total of 30 patient samples including 16 Normal, 3 AREDS grade 2 (early AMD) and 11 AREDS grade 3 (intermediate AMD) (AMD total, n = 14) were selected. Samples were obtained fro...
ORGANISM(S): Homo sapiens 
2021-12-31 | E-MTAB-11279 | biostudies-arrayexpress
TranscriptomicsTranscriptome of Escherichia coli O157:H7 (Sakai) in response to spinach leaf lysates by RNA-seq
E. coli O157:H7 can use vegetables such as spinach as secondary hosts, from where they can be transmitted into the food chain. Our previous microarray analysis showed whole-scale changes in gene expression of E. coli driven in a large part in response to plant metabolites. The aim of this work was t...
ORGANISM(S): Escherichia coli 
2018-12-13 | E-MTAB-7441 | biostudies-arrayexpress
UnknownModification of fibrous membrane for organic and pathogenic contaminants removal: from design to application.
Not available
S-EPMC9051422 | biostudies-literature
TranscriptomicsThe impact of oxygen availability on yeast survival in stationary phase.
Saccharomyces cerevisiae is currently widely used as a model to study chronological aging of metazoan cells. Chronological aging is typically studied in aerobic stationary phase (SP) cultures, i.e. the final stage of batch cultures in which growth is arrested due to exogenous carbon source exhaustio...
ORGANISM(S): Saccharomyces cerevisiae 
2016-07-03 | E-GEOD-69485 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of procyclic Trypanosoma brucei cultured at 27oC or under heat shock stress conditions at 41oC
Procyclic trypanosomes (strain 427 lister) were grown in culture under standard conditions at 27ºC in SDM79 medium with 10% foetal bovine serume (Brun and Schnenberger, 1979), in a gazed incubator (5% CO2). Logarithmically growing procyclic cells (at about 5*10^6 cells/ml, at 27°C) were added to o...
ORGANISM(S): Trypanosoma brucei 
2008-09-10 | E-MEXP-1476 | biostudies-arrayexpress
MetabolomicsGNPS - Using molecular networking for microbial secondary metabolite bioprocessing
Purves et al (2016) "Using molecular networking for microbial secondary metabolite bioprospecting" Metabolites, 6,2, 2
ORGANISM(S): Bacteria (ncbitaxon:2) 
2016-01-26 | MSV000079481 | GNPS
TranscriptomicsTranscription profiling of Trypanosoma brucei DHH1 DEAD:DQAD mutant from pLEW100 for 24 hours
Induction of the expression of the DHH1 DEAD:DQAD mutant from pLEW100 for 24 hours (thus, M-1 24 hours
Tetracycline). Uninduced cells were used as control.
ORGANISM(S): Trypanosoma brucei 
2010-01-01 | E-MEXP-2026 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Trypanosoma bruceii DHH1 wild type from pLEW100 for 24 hours
Induction of the expression of the DHH1 wild type from pLEW100 for 24 hours (M-1 24 hours Tetracycline). Non-induced cells were used as control.
ORGANISM(S): Trypanosoma brucei 
2010-01-01 | E-MEXP-2025 | biostudies-arrayexpress
TranscriptomicsExpression data from broiler chickens in response to the combined stressors of catching, transport and slaughter
The process of commercial catching, transport and slaughter (CTS) is known to be an acute stressful event in broiler chickens. Corticosteroid concentrations increase, impacting measures of IGF-1, growth hormone and metabolites of the immune system from blood plasma samples. We used ARK-Genomics chic...
ORGANISM(S): Gallus gallus 
2010-05-05 | E-GEOD-20953 | biostudies-arrayexpress
TranscriptomicsGlobal transcriptome analysis on Ankrd2 deficient or overexpressing differentiating primary myoblasts
To provide insights into the role of Ankrd2 in the pathways controlling myogenic differentiation, the gene networks that are disturbed in Ankrd2 knockout or overexpressing primary cells were explored during differentiation. Ankrd2 plays an important role in myogenic differentiation by modulating the...
ORGANISM(S): Mus musculus 
2014-03-31 | E-GEOD-43500 | biostudies-arrayexpress
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