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TranscriptomicsNoncanonical Genomic Imprinting Effects In Offspring
We report genomic imprinting effects in the arcuate nucleus, dorsal raphe nucleus, liver and muscle of adult female mice Examination of allele-specific gene expression hybrid mice generated from reciprocal crosses of CastEiJ x C57BL/6J mice
ORGANISM(S): Mus musculus 
2015-08-01 | E-GEOD-70484 | biostudies-arrayexpress
TranscriptomicsHigh resolution analysis of genomic imprinting in the embryonic and adult mouse brain AND Sex-specific imprinting in the mouse brain
Genomic imprinting results in the preferential expression of the paternal, or maternal allele of certain genes. We have performed a genome-wide characterization of imprinting in the mouse embryonic and adult brain using F1 hybrid mice generated from reciprocal crosses of CASTEiJ and C57BL/6J mice. ...
ORGANISM(S): Mus musculus 
2010-07-08 | E-GEOD-22131 | biostudies-arrayexpress
ProteomicsCLK IP-MS - CLK-dependent exon recognition and conjoined gene formation revealed with a novel small molecule inhibitor
CLK kinase was immunoprecipitated using differential tagging of the N- and C-terminus
ORGANISM(S): Homo sapiens (Human) 
2017-03-14 | PXD003839 | Pride
Kinase Immunoprecipitation Tandem mass tag 
ProteomicsInvestigating Reporter Ion Signal Characteristics in Isobaric Mass Tag Proteome Quantification Experiments
In this study we sought to examine the characteristics of the reporter ion signal obtained using current generation OT-based MS hardware. We initially focus on re-analysis of a previous experiment where TMT was using in combination with OT-MS3 to study protein expression diversity between histotypes...
ORGANISM(S): Homo sapiens (Human) Ralstonia eutropha JMP134 Yarrowia lipolytica (Candida lipolytica) 
2017-04-26 | PXD005892 | Pride
Ms3 Tmt Orbitrap fusion 
ProteomicsYeast not5 mutant protein translation analysis
Analysis of translation rate and turnover differences between wild type and not5 mutant yeast using pulse-chase mass spectrometry.
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2016-06-01 | PXD003871 | Pride
Silac Turnover Protein synthesis Yeast 
ProteomicsRaw data for the characterization of a Pseudomonas putida malonyl-ACP decarboxylase
Raw data for top down LCMS for detecting modifications on recombinant proteins, and GCMS for fatty acid methyl ester analysis. Sample nomenclature is summarized in the Powerpoint and PDF files. Details of experiments are given in the associated manuscript.
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) 
MSV000090294 | MassIVE
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