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GenomicsComposition and organization of active centromere sequences in complex genomes
We report the sequences bound to CENP-A in the dog genome (Canis familiaris) for high-throughput characterization of centromeric sequences. We compare these ChIPSeq reads (72 bp, single read) against a reference centromeric satellite DNA domain database for the dog genome, resulting in the annotatio...
ORGANISM(S): Canis lupus familiaris 
2012-07-23 | E-GEOD-38079 | biostudies-arrayexpress
TranscriptomicsExpression data from skin biopsy samples from patients with moderate-to-severe psoriasis
A gene expression profiling sub-study was conducted in which skin biopsy samples were collected from 85 patients with moderate-to-severe psoriasis who were participating in ACCEPT, an IRB-approved Phase 3, multicenter, randomized trial. This analysis identified 4,175 probe-sets as being significantl...
ORGANISM(S): Homo sapiens 
2012-07-25 | E-GEOD-30999 | biostudies-arrayexpress
TranscriptomicsTranscriptional response to P withdrawal in potato leaves
Transcriptional response to P withdrawal in potato leaves
ORGANISM(S): Solanum tuberosum 
2012-04-12 | E-MTAB-629 | biostudies-arrayexpress
UnknownProspective feasibility and safety assessment of surgical biopsy for patients with newly diagnosed diffuse intrinsic pontine glioma.
Not available
S-EPMC6176802 | biostudies-literature
GenomicsAuthentication and characterisation of a new oesophageal adenocarcinoma cell line: MFD-1
Whole genome sequencing (WGS) from snap-frozen oesophageal tumour tissue and germline nucleic acids isolated from peripheral blood mononuclear cells (PBMC) was performed as part of the International Cancer Genome Consortium project and OCCAMS consortium (1,2). Filtered read sequences were mapped to ...
ORGANISM(S): Homo sapiens 
2016-09-09 | E-MTAB-4600 | biostudies-arrayexpress
UnknownIntensive Glycemic Control Improves Long-term Renal Outcomes in Type 2 Diabetes in the Veterans Affairs Diabetes Trial (VADT).
Not available
S-EPMC6804611 | biostudies-literature
UnknownA haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes.
Not available
S-EPMC4389885 | biostudies-literature
UnknownMetabolomic biomarkers of rest-activity rhythms in older women: results from the Women's Health Initiative study.
Not available
S-EPMC12795739 | biostudies-literature
TranscriptomicsA Genomic Score Prognostic of Outcome in Trauma Patients
Physiological, anatomical, and clinical laboratory analytic scoring systems (APACHE, Injury Severity Score (ISS)) have been utilized, with limited success, to predict outcome following injury. We hypothesized that a peripheral blood leukocyte gene expression score could predict outcome, including mu...
ORGANISM(S): Homo sapiens 
2009-04-12 | E-GEOD-11375 | biostudies-arrayexpress
TranscriptomicsStriatum of Huntington's disease model mice [Affymetrix data]
Evaluation of transcriptional changes in the striatum may be an effective approach to understanding the natural history of changes in expression contributing to the pathogenesis of Huntington disease (HD). We have performed genome-wide expression profiling of the YAC128 transgenic mouse model of HD ...
ORGANISM(S): Mus musculus 
2010-02-21 | E-GEOD-18551 | biostudies-arrayexpress
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