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ProteomicsIdentification of recombinant HupS protein in vitro acetylation extent
Nucleoid-associated proteins (NAPs) are critical during the process of chromatin compaction in Streptomyces soil bacteria. HupS is one of the two NAPs encoded in the Streptomyces genome. Its unique C-terminal domain, rich in lysine repeats (LR domain), is alike to the H2B histone found in eukaryotic...
ORGANISM(S): Streptomyces venezuelae 
2024-06-03 | PXD048203 | Pride
Lc-ms Acetylation Nap protein Hups Protein modification Streptomyces Intact protein mass analysis 
ProteomicsS. venezuelae HupS protein acetylated lysine mapping via bottom-up LC-MS
Nucleoid-associated proteins (NAPs) are critical during the process of chromatin compaction in Streptomyces soil bacteria. HupS is one of the two NAPs encoded in the Streptomyces genome. Its unique C-terminal domain, rich in lysine repeats (LR domain), is alike to the H2B histone found in eukaryotic...
ORGANISM(S): Streptomyces venezuelae ATCC 10712 
2024-06-03 | PXD050776 | Pride
Lysine acetylation Proteome-scale analysis Gel band analysis Streptomyces venezuelae F2r5c9 Hups Ptm Lc-udmse Udmse Protein enrichment Bottom-up Nucleoid associated protein 
GenomicsRNA-seq of Streptomyces coelicolor hupA and hupS deletion strain
RNA-seq of Streptomyces coelicolor hupA and hupS deletion strain
PRJEB72891 | ENA
TranscriptomicsRNA-seq of Streptomyces coelicolor hupA and hupS deletion strain
HupA and HupS are nucleoid associated proteins, homologic to E. coli HU protein. Their binding to DNA changes chromosome structure, protects DNA from damage and influences gene expression. The goal of RNA-seq experiment was to determine HupA and HupS regulons during growth in liquid medium. Dataset ...
ORGANISM(S): Streptomyces coelicolor 
2024-10-28 | E-MTAB-13846 | biostudies-arrayexpress
UnknownThe activity of CobB1 protein deacetylase contributes to nucleoid compaction in Streptomyces venezuelae spores by increasing HupS affinity for DNA.
Not available
S-EPMC11229371 | biostudies-literature
UnknownThe role of two major nucleoid-associated proteins in Streptomyces, HupA and HupS, in stress survival and gene expression regulation.
Not available
S-EPMC11472566 | biostudies-literature
TranscriptomicsChIP-seq experiment of HupS-FLAG binding to Streptomyces venezuelae chromosome in wild type and SMC knockout strain
We studied the binding of HupS protein to Streptomyces venezuelae chromosome during development of aerial hyphae (14 hour of growth) using HupS-FLAG protein. Additionally investigated the role of SMC protein in HupS DNA binding using smc deletion strain.
ORGANISM(S): Streptomyces venezuelae 
2021-05-28 | E-MTAB-9821 | biostudies-arrayexpress
GenomicsChIP-seq experiment of HupS-FLAG binding to Streptomyces venezuelae chromosome in wild type and SMC knockout strain
ChIP-seq experiment of HupS-FLAG binding to Streptomyces venezuelae chromosome in wild type and SMC knockout strain
PRJEB41570 | ENA
Genomicssynthetic metagenome
Static coculture of Rhodopseudomonas palustris CGA4001 (hupS deletion) and wild-type Escherichia coli MG1655 from Indiana University, Bloomington, USA passage 1 - LT1_st_L1
PRJNA540337 | ENA
Genomicssynthetic metagenome
Shaken coculture of Rhodopseudomonas palustris CGA4001 (hupS deletion) and wild-type Escherichia coli MG1655 from Indiana University, Bloomington, USA passage 1 - LT1_sh_D1
PRJNA540328 | ENA
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