Hussong M M - OmicsDI

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Unknown (31)
Proteomics (5)
Metabolomics (4)
Genomics (1)
Transcriptomics (1)

Organisms

Andropogon gerardi (5)
Bacteria (5)
Canis lupus familiaris (5)
Cnidaria (5)
Cricetulus griseus (5)
Eukaryota (5)
Fasciola (5)
Hepatitis B virus (5)
Human betaherpesvirus 5 (5)
Madurella mycetomatis (5)
Mesocricetus auratus (5)
Miscanthus x giganteus (5)
Mus musculus (5)
Mycobacterium tuberculosis (5)
Orthoflavivirus (5)
Panicum virgatum (5)
Platyhelminthes (5)
Pseudomonas aeruginosa AES-1R (5)
Rattus norvegicus (5)
Rattus rattus (5)
Rhodococcus jostii RHA1 (5)
Saccharomyces cerevisiae (5)
Severe acute respiratory syndrome coronavirus 2 (5)
Shigella (5)
Sorghastrum nutans (5)
Streptococcus dysgalactiae subsp. equisimilis SK1249 (5)
Streptococcus pneumoniae (5)
Streptomyces coelicolor A3(2) (5)
Toxoplasma gondii (5)
Homo sapiens (2)

Repository

pride (5)
MetaboLights (4)
biostudies-arrayexpress (2)

Tissue

B cell (2)
B-cell chronic lymphocytic leukemia cell (2)
Blood (2)
Bone marrow cell (1)
Monocyte (1)
Myeloid cell (1)
Primary cell (1)
T cell (1)
T-lymphocyte (1)

Disease

Chronic lymphocytic leukemia (2)
Acute leukemia (1)
Disease free (1)

Technology Type

Mass Spectrometry (5)
Mass spectrometry (4)
Shotgun proteomics (3)
Bottom-up proteomics (2)
Data-dependent acquisition (1)

Instrument Platform

Exactive (Thermo Scientific) (2)
LTQ Orbitrap XL (Thermo Scientific) (1)
SYNAPT HDMS (Waters) (1)

Publication Date

2017 (2)
2016 (1)
2014 (1)
2018 (1)
2015 (1)
2026 (1)
2025 (1)
2024 (1)
2022 (1)
2019 (1)

CHEBI ID

CHEBI:28478|CHEBI:17445|CHEBI:18101 (1)
CHEBI:134253 (1)
CHEBI:139311 (1)
CHEBI:89624 (1)
CHEBI:134255 (1)
CHEBI:141586 (1)
CHEBI:88847 (1)
CHEBI:8087 (1)
CHEBI:134254 (1)
CHEBI:30778 (1)
CHEBI:139312 (1)
CHEBI:30745 (1)
CHEBI:17620 (1)
CHEBI:35280 (1)

Metabolite Name

Trans-4-Hydroxyproline (1)
Tert-Leucine (1)
Stearic acid (C18_0) (1)
Pentadecanoic acid (C15_0) (1)
Palmitoleic acid (C16_1n-7c) (1)
Palmitelaidic acid (C16_1n-9c) (1)
Oleic acid (C18_1n-9c) (1)
Nonadecanoic acid (C19_0) (1)
N-(Carboxymethyl)-L-alanine (1)
Myristoleic acid (C14_1n-5c) (1)
Myristic acid (C14_0) (1)
Margaric acid (C17_0) (1)
Malic acid peak 2 (1)
Malic acid peak 1 (1)
Linolelaidic acid (C18_ 2n-9,12c) (1)
Linoleic acid (C18_2n-6,9c) (1)
Hexanoic acid (C6_0) (1)
Gondoic acid (C20_1n-9c) (1)
Gamma-Linolenic acid (C18_3n-6,9,12c) (1)
EPA (C20_5n-3,6,9,12,15c) (1)
DPA (C22_5n-3,6,9,12,15c) (1)
Dodecanoic acid (C12_0) (1)
DL-gamma-methyl-ketoglutaramate isomer 1 (1)
Dimethyl aminomalonic acid (1)
DHA (C22_6n-3,6,9,12,15,18c) (1)
Conjugated linoleic acid (C18_2n-9,11c) (1)
Citric acid secondary peak (1)
Bishomo-gamma-Linolenic acid (C20_3n-6,9,12c) (1)
Arachidonic acid (C20_4n-6,9,12,15c) (1)
Arachidic acid (C20_0) (1)

Study type

ChIP-seq (1)
RNA-seq of coding RNA (1)

Release Date

2022 (4)
2020 (4)
2018 (4)
2014 (3)
2023 (3)
2021 (3)
2017 (3)
2016 (2)
2019 (2)
2025 (1)
2024 (1)
2013 (1)
2011 (1)
2006 (1)

Lab affiliation

Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory (1)
Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory (lab head) (1)
Dept. Oncology Pathology, Karolinska Institutet, and Scilifelab, Stockholm, Sweden (1)
Karolinska Institute/ScilifeLab (1)
Science for Life Laboratory, Department of Oncology-Pathology, Karolinska Institutet, Stockholm, Sweden (1)

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Regulation of the KEAP1/NRF2 oxidative stress response pathway by BRD4 in prostate and colorectal cancer

To identify genes regulated by BRD4 and to provide insight into new mechanisms de-regulated by BRD4, such as the response to oxidative stress, we integrated BRD4-binding regions with BRD4 gene expression data. For this analysis we performed BRD4 chromatin immunoprecipitation experiments and BRD4 kn...

ORGANISM(S): Homo sapiens

2014-02-28 | E-GEOD-50491 | biostudies-arrayexpress

Evaluation of a Prognostic Epigenetic Classification System in Chronic Lymphocytic Leukemia Patients.

Not available

S-EPMC8793417 | biostudies-literature

Whiplash Syndrome Reloaded: Digital Echoes of Whiplash Syndrome in the European Internet Search Engine Context.

Not available

S-EPMC5387115 | biostudies-literature

The bromodomain protein BRD4 regulates splicing during heat shock

During heat stress cyto-protective genes including heat shock proteins are transcriptionally up-regulated and post-transcriptional splicing is inhibited. In contrast, co-transcriptional mRNA-splicing is maintained. These factors closely resemble the proteotoxic stress response during tumor developme...

ORGANISM(S): Homo sapiens

2016-09-07 | E-GEOD-73471 | biostudies-arrayexpress

Posttraumatic Stress Disorder and Related Disorders among Female Yazidi Refugees following Islamic State of Iraq and Syria Attacks-A Case Series and Mini-Review.

Not available

S-EPMC5733480 | biostudies-literature

A systematic review of the unique prospective association of negative affect symptoms and adolescent substance use controlling for externalizing symptoms.

Not available

S-EPMC5344716 | biostudies-literature

Biological underpinnings of an internalizing pathway to alcohol, cigarette, and marijuana use.

Not available

S-EPMC5785427 | biostudies-literature

Frequency shifts in the anterior default mode network and the salience network in chronic pain disorder.