Intracellular antibody

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Unknown (2138)
Transcriptomics (564)
Genomics (287)
Proteomics (162)
Metabolomics (11)
Other (6)
Models (5)
Clinical (2)

Organisms

Homo sapiens (343)
Mus musculus (239)
Rattus norvegicus (20)
Drosophila melanogaster (11)
Saccharomyces cerevisiae (11)
Arabidopsis thaliana (11)
Schizosaccharomyces pombe (6)
Carassius auratus (5)
Bos taurus (5)
Escherichia coli (5)
Sus scrofa (4)
Thermus thermophilus HB8 (3)
Caenorhabditis elegans (3)
Danio rerio (3)
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (2)
Bombyx mori (2)
Pan troglodytes (2)
Listeria monocytogenes (2)
Staphylococcus aureus (2)
Salmonella enterica subsp. enterica serovar Typhimurium (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Candida albicans (2)
Waddlia chondrophila (1)
Agrobacterium tumefaciens (1)
Brucella suis 1330 (1)
Neurospora crassa OR74A (1)
Theileria parva (1)
Acropora millepora (1)
Tetrahymena thermophila (1)
Brucella melitensis bv. 1 str. 16M (1)

Organisms

Homo sapiens (68)
Mus musculus (53)
Cricetulus griseus (2)
Rattus norvegicus (2)
Saccharomyces cerevisiae (2)
Cryptococcus neoformans H99 (1)
Mycobacterium tuberculosis H37Rv (1)
Macaca mulatta (1)
Zea mays (1)
Sus scrofa (1)
Escherichia coli (1)
human gut metagenome (1)
Plasmodium berghei (1)
Toxoplasma gondii (1)

Repository

biostudies-arrayexpress (616)
ENA (149)
pride (122)
geo (103)
MetaboLights (11)
jPOST (10)
MassIVE (9)
iProX (7)
BioModels (5)
PanoramaPublic (3)
GPMDB (1)

Tissue

Cell culture (45)
Epithelial cell (17)
Brain (12)
Fibroblast (7)
Macrophage (5)
B cell (4)
HeLa cell (4)
Liver (4)
Permanent cell line cell (4)
T cell (4)
Astrocyte (3)
Breast (3)
Heart (3)
Hepatocyte (3)
Kidney (3)
Primary cell (3)
Spleen (3)
Blood (2)
Blood plasma (2)
Bone marrow (2)
Early embryonic cell (2)
Muscle (2)
Prostate gland (2)
Adrenal gland (1)
Aorta (1)
Bile (1)
Bladder (1)
Blood cell (1)
Blood platelet (1)
HepG2 cell (1)

Disease

Breast cancer (5)
Crohn's disease (4)
Cervix carcinoma (3)
Disease free (3)
Melanoma (3)
Amyotrophic lateral sclerosis (2)
Cardiovascular system disease (2)
Glioblastoma (2)
Parkinson's disease (2)
Prostate adenocarcinoma (2)
Aviremic HIV (1)
Uninfected (1)
Alzheimer's disease (1)
Kaposi's sarcoma (1)
Rheumatoid arthritis (1)
Normal (1)
Breast Neoplasms (1)
Colorectal Neoplasms (1)
Not Available (1)
Acute leukemia (1)
Adenocarcinoma (1)
Brain cancer (1)
Breast ductal carcinoma (1)
Cholangiocarcinoma (1)
Ciliopathy (1)
Colon cancer (1)
Colorectal carcinoma (1)
Drug allergy (1)
Esophageal cancer (1)
Hepatitis B (1)

Technology Type

Mass Spectrometry (122)
Shotgun proteomics (56)
Affinity purification coupled with mass spectrometry proteomics (32)
Bottom-up proteomics (25)
Data-dependent acquisition (16)
Gel-based experiment (8)
Data-independent acquisition (6)
Mass spectrometry (5)
NMR spectroscopy (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Proteogenomics (3)
SWATH MS (3)
Mass spectrometry assay (2)
Top-down proteomics (2)
NMR spectroscopy assay (1)
Affinity proteomics (1)
Immunopeptidomics (1)
MSE (1)
Mass spectrometry imaging (1)

Instrument Platform

Illumina NovaSeq 6000 (16)
NextSeq 500 (14)
Illumina HiSeq 2500 (8)
Illumina HiSeq 4000 (8)
Illumina HiSeq 2000 (7)
Q Exactive (4)
Nanostring GeoMx spatial profiler (2)
Illumina Genome Analyzer IIx (2)
- (2)
NextSeq 550 (2)
Nanostring GeoMx® spatial profiler (1)
Chromium Controller (10X Genomics) (1)
Element AVITI (1)
MA900, Sony (1)
10x Chromium Controller (1)
G2565BA DNA microarray scanner (1)
MoFlo XDP (Beckman Coulter) or a FACSAria II (Becton Dickinson) (1)
Fluidigm C1 autoprep system (1)
Solexa 2G Genome Analyzer (1)
The Agilent C scanner (1)
GenePix 4000B [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq X (1)
Ion Torrent Proton (1)
NextSeq 2000 (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1500 (1)
Instrument (1)
LTQ FT (1)
MaXis (1)

Publication Date

2014 (90)
2013 (87)
2015 (84)
2010 (83)
2011 (60)
2012 (55)
2026 (45)
2025 (44)
2008 (44)
2023 (43)
2016 (39)
2021 (38)
2022 (37)
2024 (32)
2020 (21)
2009 (21)
2007 (14)
2019 (12)
2018 (12)
2017 (9)
2006 (6)
2005 (3)

UNIPROT ID/AC

P02741 (4)
P08887 (4)
P05231 (4)

CHEBI ID

CHEBI:18237 (3)
CHEBI:15891 (3)
CHEBI:52217 (2)
CHEBI:15611 (2)
CHEBI:16927 (2)
CHEBI:16977 (2)
CHEBI:30832 (2)
CHEBI:15699 (2)
CHEBI:15428 (2)
CHEBI:17754 (2)
CHEBI:15344 (2)
CHEBI:17196 (2)
CHEBI:17115 (2)
CHEBI:16467 (2)
CHEBI:18019 (2)
CHEBI:46195 (2)
CHEBI:17203 (2)
CHEBI:18183 (2)
CHEBI:16449 (2)
CHEBI:18050 (2)
CHEBI:15971 (2)
CHEBI:16857 (2)
CHEBI:17053 (2)
CHEBI:30768 (2)
CHEBI:16135 (2)
CHEBI:16414 (2)
CHEBI:17191 (2)
CHEBI:15354 (2)
CHEBI:16643 (2)
CHEBI:17295 (2)

Metabolite Name

L-Proline (7)
Pyroglutamic acid (6)
Taurine (6)
Phosphorylcholine (6)
L-Valine (6)
L-Isoleucine (6)
L-Phenylalanine (6)
L-Aspartic acid (5)
L-Histidine (5)
Choline (5)
L-Glutamine (5)
Acetaminophen (4)
L-Alanine (4)
Saccharopine (4)
L-Lysine (4)
Glutathione (4)
ADP (4)
L-Arginine (4)
L-Asparagine (4)
L-Threonine (4)
L-Glutamic acid (4)
L-Serine (4)
L-Leucine (4)
L-Methionine (4)
4-Aminobutyraldehyde (3)
Uralenneoside (3)
Acetoacetic acid (3)
Phenol (3)
Lauroyl diethanolamide (3)
5-Aminopentanoic acid (3)

First Public Date

2026 (29)
2021 (21)
2023 (18)
2014 (15)
2025 (14)
2024 (12)
2020 (11)
2022 (9)
2018 (6)
2019 (4)
2017 (4)
2015 (4)
2016 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (4)
Agent-based model (1)

Study status

Not provided (1)
Recruiting (1)

Lab affiliation

The Key Laboratory of Molecular Biology of Infectious Diseases designated by the Chinese Ministry of Education, Chongqing Medical University, Chongqing, China. (5)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia (3)
Head of System Biology Lab. at Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency (2)
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan, Hubei,China (2)
1. Center for Medical Biotechnology, VIB, Ghent, Belgium. 2. Department for Biomolecular Medicine, Ghent University, Ghent, Belgium 3. VIB Proteomics Core, VIB, Ghent, Belgium (1)
1. Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, USA 2. UPMC Hillman Cancer Center, Pittsburgh, PA, USA 3. Department of Neurology, University of Pittsburgh, Pittsburgh, PA, USA 4. Department of Neurology, University of North Carolina, Chapel Hill, NC, USA (1)
733 N. Broadway Miller Research Building room 527 Johns Hopkins University Baltimore, MD 21205 (1)
Allakos Inc. (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. (1)
Biomedical Research Center, University Hospital Hradec Kralove, Sokolska 581, 500 05 Hradec Kralove, Czechia (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
Calico Life Sciences (1)
Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom (1)
College of chemistry and molecular engineering, Peking University. (1)
Competence Center Functional Genomics, Junior Research Group Pathoproteomics, University of Greifswald, 17489 Greifswald, Germany (1)
Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA (1)
Consiglio Nazionale delle Ricerche, Istituto di Scienze e Tecnologie Chimiche (SCITEC) "Giulio Natta" (1)
Core Facilitz Proteomics, Department of Clinical Chemistry, University Medical Center Goettingen (1)
Crick Mass Spectrometry STP (1)
Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637 Institute for Biophysical Dynamics, The University of Chicago, Chicago, IL 60637. (1)
Department of Biochemistry, Center for Biomedical Mass Spectrometry, Boston University School of Medicine, Boston, MA 02118, USA (1)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (1)
Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge MA, 02139, USA; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge MA, 02139, USA; Center for Precision Cancer Medicine, Massachusetts Institute of Technology, Cambridge MA, 02139, USA (1)
Department of Biomedical Sciences, Stellenbosch University, South Africa (1)
Department of Cellular Neurophysiology, Center for Integrative Physiology and Molecular Medicine (CIPMM), Saarland University, Homburg, Germany (1)
Department of Chemical & Systems Biology, Stanford University, USA (1)
Department of General Surgery, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, 510080, China (1)
Department of Immunobiology University of Lausanne Chemin des Boveresses 155 CH-1066 Epalinges, Switzerland (1)

Keyword

Fludarabine (1)
Cyclophosphamide (1)
Bevacizumab (1)

IsPrivate

False (5)

Classification

protozoa (2)
bacteria (2)
fungi (1)

Modification

-17.026549 (1)
15.994915 (1)
2x(15)N labeled L-lysine (1)
42.010565 (1)

Study type

Transcription profiling by array (284)
ChIP-seq (118)
RNA-seq of coding RNA (82)
Other (25)
ChIP-chip by tiling array (23)
Unknown experiment type (15)
RNA-seq of coding RNA from single cells (12)
Proteomic profiling by array (10)
ChIP-chip by array (9)
RNA-seq of non coding RNA (6)
Transcription profiling by tiling array (5)
Transcription profiling by SAGE (3)
CLIP-seq (3)
Spatial transcriptomics by high-throughput sequencing (3)
Comparative genomic hybridization by array (2)
RIP-seq (2)
Methylation profiling by array (2)
Interventional (2)
Animal - Single-cell sequencing (1)
Human - Single-cell sequencing (1)
RNAi profiling by array (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
ATAC-seq (1)
MicroRNA profiling by array (1)
DNA-seq (1)
Genotyping by high throughput sequencing (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2021 (206)
2022 (205)
2015 (185)
2014 (183)
2023 (179)
2013 (168)
2020 (155)
2025 (153)
2016 (152)
2019 (138)
2024 (129)
2010 (128)
2012 (116)
2011 (115)
2018 (115)
2017 (111)
2008 (84)
2009 (64)
2007 (30)
2026 (28)
2006 (24)
2005 (20)
1998 (12)
2004 (11)
2003 (11)
2001 (10)
1997 (6)
2002 (5)
2000 (5)
1999 (3)

Location

United States (1)
France (1)

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MARIS: Method for Analyzing RNA following Intracellular Sorting [array]

We've developed a new Method to Analyze RNA following Intracellular Sorting (MARIS) allowing us to carry out gene expression studies on cells sorted based on intracellular immunoflourescence. The purpose of this study is to determine the degree of bias that MARIS introduces on gene expression. We re...

ORGANISM(S): Homo sapiens

2014-01-13 | E-GEOD-53941 | biostudies-arrayexpress

MARIS: Method for Analyzing RNA following Intracellular Sorting [RNA-seq]

ORGANISM(S): Homo sapiens

2014-01-17 | E-GEOD-54178 | biostudies-arrayexpress

Intracellular flow cytometry staining of antibody-secreting cells using phycoerythrin-conjugated antibodies: pitfalls and solutions

Not available

S-EPMC9344851 | biostudies-literature

Dissecting the Mycobacterium bovis BCG response to macrophage infection to identify targets for anti-tuberculosis drug and vaccine discovery

New strategies are required to reduce the worldwide burden of tuberculosis. Intracellular survival and replication of Mycobacterium tuberculosis after macrophage phagocytosis is a fundamental step in the complex host-pathogen interactions that lead to granuloma formation and disease. Greater underst...

ORGANISM(S): Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2

2022-01-14 | E-MTAB-11107 | biostudies-arrayexpress

Anti-CD45RC antibody targets CD45RChigh T and B cells to mitigate pathogenic immune responses

Freshly isolated PBMCs from three healthy volunteers were incubated with a depleting antibody or its isotype control for several hours before being analysed by CITEseq and single cell RNAseq.

ORGANISM(S): Homo sapiens

2025-11-20 | E-MTAB-15576 | biostudies-arrayexpress

Generation of antagonistic biparatopic anti-CD30 antibody from an agonistic antibody by precise epitope determination and utilization of structural characteristics of CD30 molecule.

Not available

S-EPMC11826918 | biostudies-literature

Anti-IFN antibody 16 array set

Timecourse experiment (0hr, 2hr,6hr and 21hr) where RNA was extracted from non-rested PBMCs which were exposed to 4 different conditions- nothing (mock), interferon (IFN)gamma, IFN gamma and a non-specific antibody and IFN gamma with purified patient antibody. The purified patient antibody is demons...

ORGANISM(S): Homo sapiens

2005-09-17 | E-GEOD-3319 | biostudies-arrayexpress

Transcription profiling by array of human SK-N-AS neuroblastoma xenograft tumor treated with anti-human IGF-IR monoclonal antibody (h10H5) to study the anti-tumour function of the antibody

The insulin-like growth factor (IGF) system consists of two ligands (IGF-I and IGF-II), which both signal through type I IGF receptor (IGF-IR) to stimulate proliferation and inhibit apoptosis, with activity contributing to malignant growth of many types of human cancers. We have developed a humanize...

ORGANISM(S): Homo sapiens

2008-10-25 | E-GEOD-11959 | biostudies-arrayexpress

Frontiers and Opportunities: Highlights of the 2^nd Annual Conference of the Chinese Antibody Society.

Not available

S-EPMC7990132 | biostudies-literature

Comparison of gene expression in 23 Cryptococcus gattii isolates

An array analysis of C. gattii (C. bacillosporus), intended to identify loci associated with the hypervirulence of the Vancouver Island Outbreak (VIO). 23 C. gattii isolates, representing both VIO strains and control strains, were grown for 24 hours in mammalian macrophages. RNA was isolated and g...

ORGANISM(S): Cryptococcus bacillisporus

2010-05-15 | E-GEOD-17052 | biostudies-arrayexpress

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