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TranscriptomicsIron regulation in P. syringae DC3000
DC3000 cultures were grown under highly controlled conditions and after the addition of iron citrate or sodium citrate to the media. In the cultures supplemented with iron, we found that cell-associated iron increased rapidly while culture densities were not significantly different over 4 hours when...
ORGANISM(S): Pseudomonas syringae pv. tomato str. DC3000 
2008-11-07 | E-GEOD-13500 | biostudies-arrayexpress
TranscriptomicsTranscriptional characterization of tomato roots response to iron deficiency
Iron (Fe) deficiency is a yield-limiting factor for a variety of field crops across the world and generally results from the interaction of limited soil Fe bioavailability and susceptible genotype cultivation. Tomato, a Strategy I, model plant for Fe deficiency, is an important economical crop. Toma...
ORGANISM(S): Solanum lycopersicum 
2012-03-22 | E-GEOD-31112 | biostudies-arrayexpress
ProteomicsThe proteomic response of a marine Vibrio to low iron and desferrioxamine siderophore bioavailability
Competition for limited iron resources is a key driver of microbial community structure in many regions of the surface ocean. The bacterial siderophores ferrioxamine and amphibactin have been identified in marine surface waters, suggesting that they may represent an important bacterial strategy for ...
ORGANISM(S): Vibrio cyclitrophicus 1F53 
2021-04-19 | PXD011427 | Pride
Iron bioavailability Thermo fusion q-exactive Ferrioxamine Siderophore 
ProteomicsNCOA4-mediated ferritinophagy is a pancreatic cancer dependency via maintenance of iron bioavailability for iron-sulfur cluster proteins
Oncogenic KRAS rewires pancreatic ductal adenocarcinoma (PDAC) metabolism to promote dependence on autophagy and iron metabolism. NCOA4-mediated ferritinophagy links autophagy and iron metabolism as NCOA4 selectively targets ferritin, the cellular iron storage complex, via autophagy to the lysosome ...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2022-08-17 | PXD033356 | Pride
Ferritinophagy Ncoa4 Iron Pdac 
TranscriptomicsYap5-mediated transcriptional response to iron
Transcriptional response of S. cerevisiae to iron excess and Yap5 targets under high iron growth conditions.
ORGANISM(S): Saccharomyces cerevisiae 
2012-01-30 | E-MEXP-3193 | biostudies-arrayexpress
GenomicsTranscriptomic responses to iron bioavailability from virus-mediated lysates in marine prokaryotes
Transcriptomic responses to iron bioavailability from virus-mediated lysates in marine prokaryotes
PRJNA701426 | ENA
TranscriptomicsTranscriptomic responses to iron bioavailability from virus-mediated lysates in marine prokaryotes
Previous studies have demonstrated that the iron content in marine heterotrophic bacteria is comparatively higher than that of phytoplankton. Therefore, they have been indicated to play a major role in the biogeochemical cycling of iron. In this study, we aimed to investigate the potential of viral ...
ORGANISM(S): Dokdonia sp. Dokd-P16 
2021-11-01 | GSE166618 | GEO
TranscriptomicsEffect of sulfide on growth physiology and gene expression of Desulfovibrio vulgaris Hildenborough
The effect of sulfide stress on Desulfovibrio vulgaris Hildenborough (DvH) gene expression was determined by comparing the gene expression profiles of DvH under conditions in which sulfide was allowed to accumulate (high sulfide, average concentration 10 mM) against DvH cells grown under conditions...
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2010-05-06 | E-GEOD-15073 | biostudies-arrayexpress
UnknownModeling tool for calculating dietary iron bioavailability in iron-sufficient adults.
Not available
S-EPMC5533300 | biostudies-literature
UnknownBioavailability of Australian pre-schooler iron intakes at specific eating occasions is low.
Not available
S-EPMC11490464 | biostudies-literature
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