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GenomicsJapanese encephalitis virus
Japanese encephalitis virus Genome sequencing
PRJNA871976 | ENA
GenomicsJapanese encephalitis virus
Japanese encephalitis virus Genome sequencing and assembly
PRJNA855038 | ENA
TranscriptomicsRibosome profiling of Japanese encephalitis virus infected Neuro2a cells
Ribosome profiling (Ribo-Seq) and RNA-Seq analysis of mouse neuroblastoma (Neuro2a) cells infected with Japanese Encephalitis Virus (JEV) P20778 Vellore strain. At 18 h post infection (p.i.), infected cells were treated with either cycloheximide (translation elongation inhibitor) or in combination w...
ORGANISM(S): Mus musculus 
2021-07-05 | E-MTAB-9352 | biostudies-arrayexpress
TranscriptomicsmRNA expression profile in CHME3 cells infected with Japanese encephalitis virus
CHME3 cells grown on six-wells were infected with Japanese encephalitis virus (JEV) (P20778 strain ) and total RNA was isolated from cells at 6, 24 and 48 h of post infection mRNA expression was significantly altered in JEV infected human microglial cells. A time dependant change in microRNA profile...
ORGANISM(S): Homo sapiens 
2015-01-01 | E-GEOD-57330 | biostudies-arrayexpress
TranscriptomicsMicroRNA expression profile in CHME3 cells infected with Japanese encephalitis virus
CHME3 cells grown on six-wells were infected with Japanese encephalitis virus (JEV) (P20778 strain), and total RNA was isolated from cells at 6, 24 and 48 h of post infection. MicroRNA expression was significantly altered in JEV-infected human microglial cells. A time-dependent change in microRNA pr...
ORGANISM(S): Homo sapiens 
2015-01-01 | E-GEOD-57410 | biostudies-arrayexpress
ProteomicsComparison of the Human Neuronal Proteome upon Japanese Encephalitis or West Nile Virus Infection and potential role of mosquito saliva in neuropathogenesis
Neurotropic flavivirus Japanese encephalitis virus (JEV) and West Nile virus (WNV) are amongst the leading causes of encephalitis. Using label-free quantitative proteomics, we identified proteins differentially expressed upon JEV (gp-3, RP9) or WNV (IS98) infection of human neuroblastoma cells. Both...
ORGANISM(S): West Nile virus Culex pipiens pipiens Homo sapiens (Human) Japanese encephalitis virus 
2020-05-14 | PXD016805 | Pride
Mosquito Label free Japanese encephalitis West nile 
GenomicsJapanese encephalitis virus group strain:SDWF-2021
Japanese encephalitis virus SDWF-2021 strain Raw sequence reads
PRJNA1013248 | ENA
TranscriptomicsJapanese encephalitis virus live attenuated vaccine strains display altered immunogenicity, virulence and genetic diversity
The genetic diversity of JEV vaccine strains SA14-14-2, SA14-5-3 and SA14-2-8 and the WT parental WT strain they were derived from, SA14, were sequenced using Illumina technology. Passages of the strains were also sequenced to observe changes in genetic diversity.
ORGANISM(S): Japanese encephalitis virus 
2021-01-21 | E-MTAB-9385 | biostudies-arrayexpress
Proteomics- Deep proteomics network and machine learning analysis of human cerebrospinal fluid in Japanese encephalitis virus infection
- Japanese encephalitis virus (JEV) is a mosquito-borne flavivirus, and leading cause of neurological infection in Asia and the Pacific, with recent emergence in multiple territories in Australia in 2022. Patients may experience devastating socioeconomic consequences; JEV infection (JE) predominantl...
ORGANISM(S): Homo sapiens (Human) 
2023-06-08 | PXD034789 | Pride
Arbovirus - neurological infection Encephalitis Tmt Central nervous system infection Japanese encephalitis virus Flavivirus Lao pdr Brain infection Meningitis Cerebrospinal fluid (csf) 
ProteomicsEffect of ATG5 depletion on virus infection
Proteome analysis of wild-type and atg5-/- mouse embryonic fibroblasts infected with Japanese encephalitis virus
ORGANISM(S): Mus musculus (Mouse) Japanese encephalitis virus group 
2019-10-22 | PXD014986 | Pride
Atg5 Autophagy Japanese encephalitis virus Mouse embryonic fibroblasts 
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