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TranscriptomicsGene expression profiling of individual human oocytes and embryos
Early development in humans is characterised by low and variable embryonic viability, reflected in low fecundity and high rates of miscarriage, relative to other mammals. Data from assisted reproduction programmes provides additional evidence that this is largely mediated at the level of embryonic ...
ORGANISM(S): Homo sapiens 
2013-12-13 | E-MEXP-3870 | biostudies-arrayexpress
TranscriptomicsComparative genomic hybridization of variably invasive strains of Neisseria meningitidis
Genomic comparison of more and less invasive strains of Neisseria meningitidis
ORGANISM(S): Neisseria meningitidis 
2005-05-30 | E-MEXP-343 | biostudies-arrayexpress
ProteomicsEvaluation of depletion of abundant plasma proteins for proteomics characterization of EVs
In this study, we aimed to investigate if the removal of abundant plasma proteins prior to EV isolation could improve plasma-derived EV characterization by LC-MS/MS by improving the proteome coverage. Plasma depletion was performed using single-use spin columns prior to SEC-based EV isolation. After...
ORGANISM(S): Homo sapiens (Human) 
2023-07-20 | PXD039240 | Pride
Ev Plasma depletion Dia Extracellular vesicles Lc-ms/ms 
ProteomicsMorphine-treated Primary Brain Endothelial Cells LC-MS/MS DIA
This project aimed at investigating the impact of morphine exposure on brain endothelial cells via an in vitro monoculture of primary human brain microvascular endothelial cells (HBMECs) and state of the art mass spectrometry-based proteomics, using a data-independent acquisition (DIA) MS-based quan...
ORGANISM(S): Homo sapiens (Human) 
2022-03-21 | PXD024351 | Pride
Brain Dia Endothelial Morphine Lc-ms/ms 
GenomicsEGAS00001002091 - samples
Using sequencing and gene expression analyses, we identified a subgroup of HCA characterized by fusion of the INHBE and GLI1 genes and activation of sonic hedgehog pathway. Molecular subtypes of HCAs associated with different patients’ risk factors for HCA, disease progression, and pathology feature...
EGAD00001003092 | EGA
Transcriptomicsxyleme-Molecular bases of acclimation and adaptation to water deficit in poplar.
affy_popsec_orleans_poplar - xyleme - This project aims to identify candidate genes for water deficit acclimation and/or adaptation in a tree species: poplar. Due to compelling evidence that transcriptional regulation plays a major role in regulating many biological processes, we will look for genes...
ORGANISM(S): Populus x canadensis 
2012-12-15 | E-GEOD-17220 | biostudies-arrayexpress
UnknownA general and flexible method for signal extraction from single-cell RNA-seq data.
Not available
S-EPMC5773593 | biostudies-literature
TranscriptomicsLEC1::GR induction: Establishing the network of seed gene expression and analysis of its biodiversity
lec1::gr induction - Identification of LEC1 target genes - Induction of 14 days old LEC1::GR seedlings , different treatments (EtOH, DEX, DEX+ABA, induction) for 8 hours 6 dye-swap - CATMA arrays
ORGANISM(S): Arabidopsis thaliana 
2011-08-30 | E-GEOD-22173 | biostudies-arrayexpress
Transcriptomicsidentification of the mis-regulated genes in mkk3 under aba treatment.-MKK3-ABA
Identification of the mis-regulated genes in mkk3 under ABA treatment 12 dye-swap - gene knock out,treated vs untreated comparison
ORGANISM(S): Arabidopsis thaliana 
2015-05-01 | E-GEOD-59155 | biostudies-arrayexpress
MetabolomicsMetabolic Effects of a Chronic Dietary Exposure to a Low-Dose Pesticide Cocktail in Mice: Sexual Dimorphism and Role of the Constitutive Androstane Receptor (Untargeted urine UPLC-MS assay)
BACKGROUND: Epidemiological evidence suggests a link between pesticide exposure and the development of metabolic diseases. However, most experimental studies have evaluated the metabolic effects of pesticides using individual molecules, often at non relevant doses or in combination with other r...
2019-05-28 | MTBLS596 | MetaboLights
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