Kim Dam D - OmicsDI

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Unknown (66)
Transcriptomics (3)
Genomics (2)
Metabolomics (2)

Organisms

Drosophila melanogaster (2)
Mus musculus (2)
Oryza sativa Japonica Group (1)

Repository

biostudies-arrayexpress (5)
MetaboLights (2)

Technology Type

Mass spectrometry (1)
Mass spectrometry assay (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2011 (2)
2016 (1)
2014 (1)
2008 (1)
2026 (1)
2025 (1)

Metabolite Name

Narcissin (2)
Oleamide (2)
(+)-(3,3''-bi-4H-1-benzopyran)-4,4''-dione,2,2'',3,3''-tetrahydro-5,5'',7''-trihydroxy-7-methoxy-2-(4-methoxyphenyl)-2''-(4-hydroxyphenyl) (1)
(+)-Medioresinol (1)
(+)-zuonin A (1)
(+-)-9-(2-Cyanoethyl)dihydrozeatin (1)
(+/-)-oxiran-2-ylmethyl (9Z)-hexadec-9-enoate (1)
(-)-Amurensisin (1)
(-)-Epicatechin(4.beta.-->8)(-)-epigallocatechin (1)
(-)-Perillyl alcohol (1)
(-)-yatein (1)
(.+/-.)7-epi-Jasmonic acid (1)
(1-methyl-5-nitroimidazol-2-yl)methyl N-[1-[(2R,3S,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]carbamate (1)
(10S,13R,14R,16R,17R)-16-hydroxy-17-[(2R)-1-hydroxy-6-methylhept-5-en-2-yl]-4,4,10,13,14-pentamethyl-1,2,5,6,7,11,12,15,16,17-decahydrocyclopenta[a]phenanthren-3-one (1)
(1E)-1-[2,2,4-trimethyl-3-[(1E,3E,5E,7E,9E)-3,7,12-trimethyltrideca-1,3,5,7,9,11-hexaenyl]cyclohex-3-en-1-ylidene]propan-2-one (1)
(1E,3E,5E,7E,9E,11E,13E,15Z)-1-[(2R,4S)-2,4-dihydroxy-2,6,6-trimethylcyclohexylidene]-16-(hydroxymethyl)-18-[(4R)-4-hydroxy-2,6,6-trimethylcyclohexen-1-yl]-3,7,12-trimethyloctadeca-3,5,7,9,11,13,15-heptaen-17-yn-2-one (1)
(1E,4E)-1-(3,4-dimethoxyphenyl)-5-(4-hydroxy-3-methoxyphenyl)penta-1,4-dien-3-one (1)
(1E,6E)-1-(4-hydroxy-3-methoxyphenyl)-7-(2-hydroxyphenyl)hepta-1,6-diene-3,5-dione (1)
(1R)-3,5,5-trimethyl-4-[(3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol (1)
(1R,2R,3S,4S)-4-(2-hydroxyethyl)-2,3-bis(phenylmethoxymethyl)cyclopentan-1-ol (1)
(1R,2R,4S,4aS,6aS,6aS,6bR,12aS,14bS)-1,4,11-trihydroxy-1,2,6a,6b,9,12a-hexamethyl-10-oxo-2,3,4,5,6,6a,7,8,13,14b-decahydropicene-4a-carboxylic acid (1)
(1R,2R,4aS,6aR,6aS,6bR,8R,8aR,10S,12aR,14bS)-1,8,10-trihydroxy-1,2,6a,6b,12a-pentamethyl-9-methylidene-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid (1)
(1R,2R,4aS,6aR,6aS,6bR,8aR,10S,11R,12aR,14bS)-1,10,11-trihydroxy-1,2,6a,6b,12a-pentamethyl-9-methylidene-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid (1)
(1R,2S,4S,4aS,8aS)-4a,8,8-trimethyl-1,2,3,4,5,6,7,8a-octahydronaphthalene-1,2,4-triol (1)
(1R,3R,4S,5R)-1,3,4-trihydroxy-5-[(E)-3-(3-hydroxy-4-methoxyphenyl)prop-2-enoyl]oxycyclohexane-1-carboxylic acid (1)
(1R,3aS,4E,7aR)-4-[2-[(3R,5R)-3,5-dimethyl-4-methylidenecyclohexylidene]ethylidene]-7a-methyl-1-[(E,2S)-6-methylhept-3-en-2-yl]-2,3,3a,5,6,7-hexahydro-1H-indene (1)
(1R,3aS,5aR,5bR,7aR,11aR,11bR,13aR,13bR)-5a,5b,8,8,11a-pentamethyl-9-oxo-1-prop-1-en-2-yl-2,3,4,5,6,7,7a,11b,12,13,13a,13b-dodecahydro-1H-cyclopenta[a]chrysene-3a-carbaldehyde (1)
(1R,3aS,5aS,5bR,7aR,11aR,11bR,13aR,13bR)-5b,8,8,11a-tetramethyl-7,9-dioxo-1-prop-1-en-2-yl-1,2,3,4,5,6,7a,10,11,11b,12,13,13a,13b-tetradecahydrocyclopenta[a]chrysene-3a,5a-dicarboxylic acid (1)
(1R,4R,7R,8R,10R,13R,14S)-13,14-diethyl-7-[(3R,4S,6R)-3-hydroxy-4,6-dimethyloxan-2-yl]oxy-4,6,6,8,10-pentamethyl-17-[4-(4-pyridin-4-ylimidazol-1-yl)butyl]-12,15-dioxa-17-azabicyclo[12.3.0]heptadecane-3,9,11,16-tetrone (1)
(1R,4aR,6aR,6aS,6bR,8aR,10S,12aR,14bS)-1-hydroxy-1,6a,6b,9,9,12a-hexamethyl-2-methylidene-10-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-4,5,6,6a,7,8,8a,10,11,12,13,14b-dodecahydro-3H-picene-4a-carboxylic acid (1)

Study type

ChIP-seq (2)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Transcription profiling by array (1)

Release Date

2024 (13)
2021 (10)
2023 (6)
2022 (6)
2015 (6)
2025 (4)
2020 (4)
2017 (4)
2014 (3)
2011 (3)
2019 (3)
2026 (2)
2013 (2)
2012 (2)
2016 (1)
2008 (1)
2005 (1)

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Identifying targets of DSX with DamID-seq

We have adapted the DamID protocol for use with high throughput sequencing. We have used DamID to identify the positions within the Drosophila genome where the transcription factor DSX is bound. We sequenced DpnI-digested genomic DNA from fly tissues containing UAS-Dam (control) or UAS-Dam-DsxF or ...

ORGANISM(S): Drosophila melanogaster

2014-10-30 | E-GEOD-27269 | biostudies-arrayexpress

B-type lamins differentially associate with specific genes during differentiation without directly affecting their expression

B-type lamins, the major structural component of the nuclear lamina, is thought to play a repressive role in the expression of many of its bound genes whose silencing are known to be critical for cell differentiation during early development. Using global mapping of lamin-B-chromatin interaction, w...

ORGANISM(S): Mus musculus

2011-10-31 | E-GEOD-24532 | biostudies-arrayexpress

High oxygen prevents fetal lethality due to lack of catecholamines

The catecholamine norepinephrine is required for fetal survival, but its essential function is unknown. When catecholamine-deficient [tyrosine hydroxylase (Th) null] mouse fetuses die at E13.5-E14.5, they resemble wild type fetuses exposed to hypoxia. They exhibit bradycardia (28% reduction in hear...

ORGANISM(S): Mus musculus

2008-06-03 | E-GEOD-10341 | biostudies-arrayexpress

Systemic coccidioidomycosis in a llama cria native to Missouri.

Not available

S-EPMC8120084 | biostudies-literature

A direct role for cohesin in genome-wide gene regulation and Ecdysone-response in Drosophila salivary gland

Developmental abnormalities observed in Cornelia de Lange Syndrome (CdLS) have been genetically linked to mutations in the cohesin machinery. These findings raise the possibility that cohesin, in addition to its canonical function of mediating sister chromatid cohesion, might also be involved in reg...

ORGANISM(S): Drosophila melanogaster

2011-03-22 | E-GEOD-21874 | biostudies-arrayexpress

Nucleolin: acharan sulfate-binding protein on the surface of cancer cells.

Not available

S-EPMC1237021 | biostudies-literature

Somatic cancer driver mutations are enriched and associated with inflammatory states in Alzheimer's disease microglia.

Not available

S-EPMC10802273 | biostudies-literature

Development and External Validation of a Predictive Model of Severe Neonatal Calf Diarrhea in Hanwoo Calves Using Animal, Environmental, and Management Risk Factors.

Not available

S-EPMC12445427 | biostudies-literature

Inhibition of jasmonic acid-isoleucine conjugating enzyme JAR1 shifts the local and systemic leaf signals and metabolic profiles in Arabidopsis

• Jasmonates (JAs)-mediated pathways are central signaling hubs in plant defense responses. However, the identification of mobile and non-mobile signals involved in downstream systemic signaling is still less studied.

• Here, we investigate the role of the jasmonic acid-isoleucine conjugati...

2026-03-31 | MTBLS14117 | MetaboLights

Definition of the contribution of an Osteopontin-producing CD11c⁺ microglial subset to Alzheimer's disease.

Not available

S-EPMC9963365 | biostudies-literature

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