Kim Paul P - OmicsDI

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Unknown (492)
Genomics (59)
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Homo sapiens (69)
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pride (6)
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Mass Spectrometry (6)
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2015 (6)
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CHEBI ID

CHEBI:78679 (2)
CHEBI:17858 (2)
CHEBI:48928 (2)
CHEBI:17497 (2)
CHEBI:17154 (2)
CHEBI:17568 (2)
CHEBI:16704 (2)
CHEBI:78682 (2)
CHEBI:15422 (2)
CHEBI:32816 (2)
CHEBI:16919 (2)
CHEBI:17596 (2)
CHEBI:15865 (1)
CHEBI:194376 (1)
CHEBI:79081 (1)
CHEBI:11814 (1)
CHEBI:165842 (1)
CHEBI:18303 (1)
CHEBI:27847 (1)
CHEBI:16894 (1)
CHEBI:191711 (1)
CHEBI:17980 (1)
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CHEBI:16337 (1)
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CHEBI:37050 (1)
CHEBI:144330 (1)
CHEBI:133083 (1)
CHEBI:16039 (1)
CHEBI:17167 (1)

Metabolite Name

6-phospho-2-dehydro-D-gluconate(1-) (1)
Uridine 5-diphosphate (1)
Propionyl coenzyme A (1)
Phosphatidic Acid (1)
Orotidine 5-monophosphate (1)
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3-hydroxypentanedioic acid (1)
3-Hydroxybutyryl coenzyme A (1)
2-Deoxyuridine 5-monophosphate (1)
2-Deoxyribose-5-phosphate (1)
2-Deoxy-D-ribonic acid (1)
2-Deoxycytidine 5-diphosphate (1)
2-Deoxy-5-cytidylic acid (1)
2,3-Diphospho-D-glyceric acid (1)
2-(Hydroxymethyl)butanoic acid (1)
Uridine 5-diphosphoglucose (1)
Uridine 5-diphosphogalactose (1)
Pyridoxamine-5-phosphate (1)

Study type

Transcription profiling by array (14)
Unknown experiment type (6)
Comparative genomic hybridization by array (2)
Methylation profiling by array (2)
RNA-seq of coding RNA (2)
ChIP-chip by tiling array (1)
Genotyping by array (1)
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Release Date

2021 (61)
2023 (54)
2025 (51)
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2015 (39)
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2016 (31)
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2018 (26)
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2010 (13)
2011 (6)
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2008 (1)
2006 (1)
2004 (1)
2001 (1)

Lab affiliation

Associate Professor, Department of Biomedical Sciences,Affiliated with The Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen (1)
Department of Biochemistry and Biophysics Smilow Center for Translational Research Perelman School of Medicine University of Pennsylvania United States (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) San Francisco, CA 94158 USA (1)
Member Cell and Molecular Biology Department St. Jude Children's Research Hospital Memphis, TN-38105 (1)
Member Cell&Molecular Biology Department St.Jude Children's Research Hospital Memphis, TN-38105 (1)
Proteomics and Metabolomics Core Facility, Biomedical Research Institute, Seoul National University Hospital (1)

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Competition or indifference: Neutron-Encoding to profile linkage selectivity of deubiquitinating enzymes

This data set contains all raw data files in the mzXML (for LC-MS data) format that belongs to the manuscript "Competition or indifference: Neutron-Encoding to profile linkage selectivity of deubiquitinating enzymes" by Bianca D. M. van Tol, Bjorn R. van Doodewaerd, Guinevere S. M. Lageveen-Kammeije...

ORGANISM(S): Synthetic Ubiquitins

2022-10-05 | MSV000090455 | MassIVE

Comprehensive genome-scale and pathway engineering for production of the sustainable aviation fuel in Pseudomonas putida

Biological production of aviation fuels has a realistic impact on global warming. Important sustainable aviation fuel (SAF) targets are emerging and isoprenol is recently identified as a precursor for a promising SAF compound DMCO (1,4-dimethylcyclooctane). Isoprenol has been produced in several eng...

ORGANISM(S): Pseudomonas Putida Kt2440

PXD039868 | panorama

Fertility protection during chemotherapy treatment by boosting the NAD(P)⁺ metabolome.

Not available

S-EPMC11473878 | biostudies-literature

The genome of Streptomyces rimosus shows a novel structure compared to other Streptomyces

This study compared the genome of Streptomyces rimosus rimosus against that of Streptomyces coelicolor. It also compared 4 strains with changes in oxytetracycline production and derived from G7, the type strain, against G7. Duplicate samples, each replicate may be found in the corresponding suppleme...

ORGANISM(S): Streptomyces rimosus

2010-05-26 | E-GEOD-10126 | biostudies-arrayexpress

Phenotypic but no genetic adaptation in zooplankton 24 years after an abrupt +10°C climate change.

Not available

S-EPMC9346084 | biostudies-literature

Phase I trial of a novel anti-GD2 monoclonal antibody, Hu14.18K322A, designed to decrease toxicity in children with refractory or recurrent neuroblastoma.

Not available

S-EPMC4017710 | biostudies-literature

Transversus abdominis plane infiltration for laparoscopic gastric banding: A pilot study.

Not available

S-EPMC3942536 | biostudies-literature

Plasma proteome profiling of Osteoporosis Sarcopenia (OsteoSarc) cohort

Sarcopenia is an age-related condition characterized by progressive decline in muscle mass, strength, and physical performance, contributing to frailty and adverse health outcomes. Despite increasing interest in molecular biomarkers, longitudinal data with external validation are limited. This study...

ORGANISM(S): Homo sapiens (Human)

2026-03-09 | PXD070542 | Pride

Prospective, Randomized, Double-Blind, Phase III Clinical Trial of Anti-T-Lymphocyte Globulin to Assess Impact on Chronic Graft-Versus-Host Disease-Free Survival in Patients Undergoing HLA-Matched Unrelated Myeloablative Hematopoietic Cell Transplantation.

Not available

S-EPMC8462523 | biostudies-literature

Phase II trial of erlotinib plus concurrent whole-brain radiation therapy for patients with brain metastases from non-small-cell lung cancer.

Not available

S-EPMC3577951 | biostudies-literature

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