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ProteomicsExpression proteome profiling of MND response in HeLa cells
We comprehensively analyzed the protein expression in HeLa cells treated with 50 µM menadione for 1 h.
ORGANISM(S): Homo Sapiens (human) 
2025-07-31 | PXD057923 | JPOST Repository
ProteomicsFLAG-IP-MS analyses of novel oxidative stress responsive translation factors
We identified translation-related factors with significantly elevated cysteine oxidation upon MND treatment by our redox proteomics method DIALRP. Notably, our data demonstrate that the inhibition of such as EIF2, EIF6, and EEF2 complex formation due to oxidative stress occurs during the cellular re...
ORGANISM(S): Homo Sapiens (human) 
2025-07-31 | PXD057922 | JPOST Repository
ProteomicsRedox proteomics DIALRP to study MND response in DU145 cells
In this study, we developed a label-free redox proteomics method using data-independent acquisition mass spectrometry (DIA-MS), termed DIALRP, to comprehensively analyze cysteine oxidative modifications in the prostate cancer cell line DU145 under oxidative stress induced by menadione (MND).
ORGANISM(S): Homo Sapiens (human) 
2025-07-31 | PXD057921 | JPOST Repository
TranscriptomicsBacterial c-di-GMP reorganizes hematopoietic stem/progenitors and niches through STING
Upon systemic bacterial infection, hematopoietic stem and progenitor cells (HSPCs) migrate to the periphery in order to supply a sufficient number of immune cells. Although pathogen-associated molecular patterns (PAMPs) reportedly mediate HSPC activation, how HSPCs detect pathogen invasion in vivo r...
ORGANISM(S): Mus musculus 
2015-02-13 | E-GEOD-65905 | biostudies-arrayexpress
ProteomicsSWATH-MS in EF1A1- and EF1A2-deficient Schwann and MPNST cells
The proteins expressed in normal human Schwann and sNF96.2 MPNST cells treated with EF1A1- and EF1A2-siRNA were profiled by SWATH-MS.
ORGANISM(S): Homo Sapiens (human) 
2018-11-05 | PXD007603 | JPOST Repository
ProteomicsSWATH-MS in TCTP-deficient MPNST cells
EF1A2-binding proteins in TCTP-deficient MPNST cells were identified by immuno-precipitation using anti-FLAG antibody and SWATH. To verify whether the change of the amount of EF1A2-binding proteins caused the cellular expression change, the proteins expressed in sNF96.2 MPNST cells treated with TCTP...
ORGANISM(S): Homo Sapiens (human) 
2018-11-05 | PXD007606 | JPOST Repository
ProteomicsEF1A2-binding proteins in TCTP-deficient MPNST cells
EF1A2-binding proteins in TCTP-deficient MPNST cells were identified by immuno-precipitation using anti-FLAG antibody and SWATH.
ORGANISM(S): Homo Sapiens (human) 
2018-11-05 | PXD007605 | JPOST Repository
ProteomicsTCTP binding proteins by gel-based identification
TCTP binding proteins were analyzed by SDS-PAGE gel-based protein identification.
ORGANISM(S): Homo Sapiens (human) 
2018-11-05 | PXD007607 | JPOST Repository
ProteomicsTCTP interactome analysis by AP-SWATH
TCTP binding proteins were identified by immunoprecipitation using anti-FLAG antibody and SWATH acquisition.
ORGANISM(S): Homo Sapiens (human) 
2018-11-05 | PXD007578 | JPOST Repository
ProteomicsEF1A1 and EF1A2 interactome analysis by AP-SWATH
EF1A1- and EF1A2-binding proteins were identified by immuno-precipitation using anti-FLAG antibody and SWATH.
ORGANISM(S): Homo Sapiens (human) 
2018-11-05 | PXD007604 | JPOST Repository
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