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TranscriptomicsPervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae
Protein-RNA interactions are integral components of nearly every aspect of biology including regulation of gene expression, assembly of cellular architectures, and pathogenesis of human diseases. However, studies in the past few decades have only uncovered a small fraction of the vast landscape of t...
ORGANISM(S): Saccharomyces cerevisiae 
2013-01-29 | E-GEOD-43747 | biostudies-arrayexpress
ProteomicsIntegrative proteo-genomic profiling uncovers key biomarkers of lapatinib resistance in HER2-positive breast cancer
To understand the transcriptomic, genomic and proteomics changes between HER2 overexpressingcells and those that have become resistant to lapatinib
ORGANISM(S): Homo sapiens (Human) 
2025-11-17 | PXD056848 | Pride
3d Chromatin Proteomics Epigenetics Resistance Her2 Lc-ms/ms 
Unknownp16 protein expression and human papillomavirus status as prognostic biomarkers of nonoropharyngeal head and neck squamous cell carcinoma.
Not available
S-EPMC4251957 | biostudies-literature
ProteomicsThe branched-chain amino acid transporter AAT10.2 of Trypanosoma brucei is regulated by substrate availability
A phosphoproteome analysis of procyclic form T. brucei revealed many amino acid transporters (AATs) of the amino acid/auxin permease (AAAP) family with phosphorylated residues exclusively in their hydrophilic N-terminal domain. AAT10.2, which contained multiple phosphorylated residues, was further c...
ORGANISM(S): Trypanosoma brucei 
2026-09-14 | PXD079824 | Pride
Phosphoproteomics Amino acid Branched-chain amino acids Transport Parasite Substrate specificity Tb927.8.8300 
TranscriptomicsLARP1 mRNP scaffolds mTORC1 to stimulate translation initiation of an essential class of mRNAs
The RNA biding protein, LARP1, has been proposed to function downstream of mTORC1 to positively regulate the translation of 5M-bM-^@M-^YTOP mRNAs such as ribosome protein (RP) mRNAs. However, its regulatory roles in mTORC1-mediated translation remain unclear. PAR-CLIP of LARP1 revealed its direct an...
ORGANISM(S): Homo sapiens 
2014-07-31 | E-GEOD-59599 | biostudies-arrayexpress
ProteomicsCPTAC CCRCC Discovery Study - DIA Proteome
This is a supplementary study to the CPTAC CCRCC Discovery Study - Proteome. Unlabeled, digested peptide material from individual tissue samples (ccRCC and NAT) was spiked with index Retention Time (iRT) peptides (Biognosys) and subjected to data-independent acquisition (DIA) analysis. Kidney cance...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-10-04 | MSV000093041 | MassIVE
UnknownApical Suspension Repair for Vaginal Vault Prolapse: A Randomized Clinical Trial.
Not available
S-EPMC11112501 | biostudies-literature
UnknownControlling faecal incontinence in women by performing anal exercises with biofeedback or loperamide: a randomised clinical trial.
Not available
S-EPMC6708078 | biostudies-literature
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