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ProteomicsStable isotope probing with 13C-labeled bicarbonate/proteomics of cyanobacterial consortium collected from photobioreactors enriched from soda lake microbial mats in BC, Canada
In this work we used stable isotope probing/proteomics to study uptake of carbon sources by members of the cyanobacterial consortium. The database for protein identification was obtained from assembled metagenomes.
ORGANISM(S): Phormidium sp. OSCR 
2022-01-21 | PXD028578 | Pride
Heterotrophs Stable isotope probing Cyanobacteria 
ProteomicsProteomics of groundwater microbiomes collected from five wells in Alberta, Canada
Groundwater samples were collected from five wells in Alberta, Canada. The sampling location and time are indicated in the table below. 13 to 29 genomes were assembled from each metagenome. Proteomic analyses were performed to investigate which genomes and genes were expressed in each well. Sample I...
ORGANISM(S): uncultured Methylotenera sp. 
2024-05-21 | PXD044305 | Pride
Metaproteomics Metagenome-assembled-genomes Metaproteome Groundwater 
ProteomicsFrequency of change determines effectiveness of microbial response strategies in sulfidic stream microbiomes
Chemostat incubations were established and inoculated with sediments collected from Canyon Creek, Calgary, Alberta, Canada. The chemostats experienced oxic-anoxic change of different frequency, High-frequency, Medium-frequency and Low-frequency. 18 samples were collected at the end of the final oxic...
ORGANISM(S): Arenimonas sp. Acidovorax 
2023-04-26 | PXD028583 | Pride
Chemostat incubation Metagenome-assembled-genomes Metaproteomics Metaproteome 
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