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TranscriptomicsExpression data from 5 day old Arabidopsis thaliana seedlings
Upon induction of DNA damage Arabidopsis thaliana plants initiate a transcriptional response program governed by signalling cascades which are activated by the ATM and ATR kinases To analyse if the ATM dependent gene GMI1 (At5G24280) is involved in the regulation of the transcriptionl response, we c...
ORGANISM(S): Arabidopsis thaliana 
2011-04-21 | E-GEOD-23892 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Pichia pastoris strain GS115 transformed with the empty vector pGAPHIS or consitutively overproducing the activated form of S. cerevisiae Hac1
Strain GS115 transformed with the empty vector pGAPHIS (a histidine prototrophic isogenic strain of GS115) was compared to Strain GS115 HAC1, constitutively overproducing the activated form of S. cerevisiae Hac1
ORGANISM(S): Pichia pastoris 
2008-09-23 | E-MEXP-1616 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Pichia pastoris treated with dithiothereitol to induce unfolded protein response
Experiment aims to induce unfolded protein response in Pichia pastoris, set-up was chosen to be comparable results to DTT experiment.
ORGANISM(S): Pichia pastoris 
2008-09-23 | E-MEXP-1615 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila mechanoreceptor-rich tissue compared mechanoreceptor-poor tissue shows DCX-EMAPis required for mechanoreception in sensory cilia
Determining which genes are expressed in mechanoreceptor-rich tissue (pedicel) compared mechanoreceptor-poor tissue (capitellum) and a neuronal subtraction control (thoracic ganglion) in Drosophila melanogaster
ORGANISM(S): Drosophila melanogaster 
2009-05-01 | E-MEXP-1921 | biostudies-arrayexpress
UnknownThe response to unfolded protein is involved in osmotolerance of Pichia pastoris.
Not available
S-EPMC2867824 | biostudies-literature
UnknownThe transcriptome of syncytia induced by the cyst nematode Heterodera schachtii in Arabidopsis roots.
Not available
S-EPMC2667683 | biostudies-literature
UnknownDetecting and correcting systematic variation in large-scale RNA sequencing data.
Not available
S-EPMC4160374 | biostudies-literature
TranscriptomicsDeep sequencing of small RNAs in the trasngenic wild type plant and the IWR1-type transcription factor mutant, dms4
Full title: Deep sequencing of small RNAs in the trasngenic wild type plant (contains trigger and silencer transgenes) and the IWR1-type transcription factor mutant, dms4 RNA-directed DNA methylation (RdDM) in plants requires two RNA polymerase II (PolII)-related RNA polymerases named PolIV and Pol...
ORGANISM(S): Arabidopsis thaliana 
2010-03-31 | E-GEOD-18302 | biostudies-arrayexpress
UnknownAugmenting precision medicine via targeted RNA-Seq detection of expressed mutations.
Not available
S-EPMC12166063 | biostudies-literature
UnknownTargeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing.
Not available
S-EPMC11329654 | biostudies-literature
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