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ProteomicsExosomes from mesenchymal stromal cells reduce murine colonic inflammation via a macrophage-dependent mechanism
Conventional treatments for inflammatory bowel disease (IBD) have multiple potential side effects. Therefore, alternative treatments are desperately needed. In the present study, we proposed a new therapeutic tool for the treatment of IBD in murine pre-clinical models by using MSC-Exos. We demonstra...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2020-05-27 | PXD015386 | Pride
Inflammatory bowel disease Exosomes Macrophages Mesenchymal stromal cells 
ProteomicsArabidopsis root hair protoplasts
Using cell sorting technique, we collected Arabidopsis root hair protoplasts (transgenic line harboring root hair specific gene promoter ::GFP, here named GFP) and nonGFP protoplasts( whole root except root hair). Then, we extracted total proteins and RNA for proteome and RNASeq. RNAseq data have al...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2013-05-28 | PXD000195 | Pride
Arabidopsis rot hair Lc-ms/ms 
TranscriptomicsMapping Gene Activity of Arabidopsis Root Hairs
We provide an atlas of gene and protein expression in Arabidopsis root hair cells, generated by paired-end RNA-seq and LC/MS-MS analysis from protoplasts that carry the root hair-specific pEXP7-GFP reporter construct. In total, transcripts from 23,234 genes were detected in root hairs; those related...
ORGANISM(S): Arabidopsis thaliana 
2012-12-04 | E-MTAB-4375 | biostudies-arrayexpress
ProteomicsProteomic data of wheat in response to Pi deficiency
To decipher the underlying molecular mechanisms for high PUE, the shoots of the two wheat genotypes, H4399 and TM98, under +Pi or −Pi treatments were separately collected for proteomic analysis.
ORGANISM(S): Triticum aestivum (Wheat) 
2023-04-20 | PXD040904 | Pride
Proteomics Wheat 
ProteomicsIdentification of interacting proteins with circPLCE1-411 in hunan colorectal cancer cell by LC-MS
To identify the unknown interacting proteins with circPLCE1-411, we extracted the proteins from HCT8 cells and performed co-immunoprecipitation assays with Flag antibody. Then the proteins were subjected to mass spectrometry
ORGANISM(S): Homo sapiens (Human) 
2021-09-10 | PXD023617 | Pride
Circplce1-411 Lc-ms Interacting proteins Hunan colorectal cancer cell 
UnknownDoes inclusion of bioactive n-3 PUFAs in parenteral nutrition benefit postoperative patients undergoing liver surgery? A systematic review and meta-analysis of randomised control trials.
Not available
S-EPMC10503353 | biostudies-literature
ProteomicsReceptor identification of Cyr61 on hunan colorectal cancer cell by LC-MS
To identify the unknown receptor, we extracted the membranous proteins from HCT8 cells treated with rCyr61.Then the proteins were subjected to mass spectrometry
ORGANISM(S): Homo sapiens (Human) 
2022-02-15 | PXD019954 | Pride
Receptor Cyr61 Lc-ms Hunan colorectal cancer cell 
ProteomicsNear complete quantitative proteomics for Yeast
In this study, we attempted to achieve to date the most comprehensive coverage of the yeast proteome during log-phase growth and in the K11R mutant ubiquitin yeast strain with a combination of (1) extensive gel molecular weight fractionation and use of either of two digestion enzymes to improve cove...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2019-08-26 | PXD001928 | Pride
Yeast High coverage Silac Proteome Lc-ms/ms 
Proteomicsproteomic signature to predict ACT in CRC
High-throughput proteomics profiling-derived signature associated with chemotherapy response and survival for stage II/III colorectal cancer
ORGANISM(S): Homo Sapiens 
2023-06-19 | PXD043116 |
UnknownIntra-Host Co-Existing Strains of SARS-CoV-2 Reference Genome Uncovered by Exhaustive Computational Search.
Not available
S-EPMC10224212 | biostudies-literature
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