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MetabolomicsMolecular investigation of Tuscan sweet cherries sampled over three years: gene expression analysis coupled to metabolomics and proteomics

Sweet cherry (Prunus avium L.) is a stone fruit widely consumed and appreciated for its organoleptic properties, as well as its nutraceutical potential. We here investigated the characteristics of six non-commercial Tuscan varieties of sweet cherry maintained at the Regional Germplasm Ba...

2021-10-29 | MTBLS1803 | MetaboLights
MetabolomicsAn Integrated Biochemical, Proteomics, and Metabolomics Approach for Supporting Medicinal Value of Panax ginseng Fruits (GC-MS assay)
Panax ginseng roots are well known for their medicinal properties and have been used in Korean and Chinese traditional medicines for 1000s of years. However, the medicinal value of P. ginseng fruits remain poorly characterized. Using gas chromatography-time of flight mass spectrometry (GC-TOF MS), 6...
2016-11-18 | MTBLS350 | MetaboLights
UnknownProteomics and Metabolomics: Two Emerging Areas for Legume Improvement.
Not available
S-EPMC4689856 | biostudies-literature
ProteomicsThe ALLPreT panel of legume allergen preparations: Optimization of total protein extracts and characterization of allergen composition, IgE-binding- and functional cross-linking properties, for the development of an ‘Allergenicity Prediction Toolbox for novel foods’
A protein-naming framework was established to determine the relative abundance of both allergens and non-allergenic proteins in 13 different legume seed extracts (roasted peanut, unroasted peanut, soybean, sweet blue lupine, winter pea, beluga lentils, chickpea, field bean, white kidney bean, fenugr...
ORGANISM(S): Cicer arietinum (Chickpea) (Garbanzo) Pisum sativum (Garden pea) Trifolium pratense Glycine max Arachis hypogaea (Peanut) Trigonella foenum-graecum Trifolium repens Medicago sativa (Alfalfa) Lupinus angustifolius Phaseolus vulgaris (Kidney bean) (French bean) Vicia faba Lens culinaris 
2026-10-01 | PXD079632 | Pride
Allergenicity assessment Proteomics Allpret Data independent acquisition Mass spectrometry Allergen extracts Legumes Ige Food allergy 
ProteomicsExtracellular membrane vesicle-driven crosstalk between legume plants and rhizobia: the symbiosome space as protein trafficking interface
Prokaryotes and eukaryotes secrete extracellular membrane vesicles (MVs) into the extracellular milieu to preserve and transport elevated concentrations of a given cargo across long distances. MVs encapsulate metabolites, DNA, RNA, and proteins, whose abundance and composition fluctuate depending on...
ORGANISM(S): Lobelia burttii subsp. burttii Sinorhizobium fredii HH103 Rhizobium tropici CIAT 899 
2025-05-07 | PXD056185 | Pride
Symbiosome space Symbiosis Legume Rhizobium Extracellular membrane vesicles Bacteroid 
ProteomicsShotgun proteomics of soybean root nodules infected by Bradyrhizobium japonicum
Global bottom-up proteomics analysis of proteins purified from soybean root nodules infected with either WT or nifH- mutant Bradyrhizobium japonicum. Nine glycoproteins containing Lewis-a N-glycans, with 3 distinct Lewis-a epitopes (Hex:5 HexNAc:4 dHex:3 Pent:1, Hex:4 HexNAc:4 dHex:2 Pent:1, and Hex...
ORGANISM(S): Glycine Max (ncbitaxon:3847) 
2022-01-31 | MSV000088754 | MassIVE
ProteomicsTwo Legume Fatty Acid Amide Hydrolase Isoforms with Distinct Preferences for Microbial- and Plant-Derived Acylamides
We combined computational and biochemical approaches to compare the structural and enzymatic properties of two FAAH isoforms in the legume Medicago truncatula designated MtFAAH1 and MtFAAH2a.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Medicago truncatula (Barrel medic) (Medicago tribuloides) 
2023-04-27 | PXD038494 | Pride
Recombinant protein Lc-msms 
UnknownProteomics analysis of round and wrinkled pea (Pisum sativum L.) seeds during different development periods.
Not available
S-EPMC11794676 | biostudies-literature
ProteomicsDirect Coupling of Nod Factor Signaling to Vesicular Trafficking Initiates Legume Nodulation
Legume–rhizobium symbiosis requires coordinated receptor signaling and membrane trafficking to initiate infection thread formation in root hairs. Here, we identify the soybean Qa-SNARE GmSYNTAXIN111a (GmSYP111a), a close paralog of the cytokinesis-associated protein KNOLLE, as a critical regulator o...
ORGANISM(S): Glycine max Arabidopsis thaliana (Mouse-ear cress) 
2026-07-10 | PXD068787 | Pride
Legume–rhizobium symbiosis Clathrin-mediated endocytosis Kinase client assay Infection thread initiation Soybean nodulation Phosphorylation Snare complex regulation 
UnknownRapid phosphoproteomic and transcriptomic changes in the rhizobia-legume symbiosis.
Not available
S-EPMC3434772 | biostudies-literature
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