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UnknownComparative Proteome Profiling of Saliva Between Estrus and Non-Estrus Stages by Employing Label-Free Quantitation (LFQ) and Tandem Mass Tag (TMT)-LC-MS/MS Analysis: An Approach for Estrus Biomarker Identification in Bubalus bubalis.
Not available
S-EPMC9217162 | biostudies-literature
ProteomicsColorectal cancer anti-ORF1p LFQ IP-MS
Here, three colorectal tumors were subjected to anti-ORF1p LFQ, IP-MS: (A) Krukenberg Carcinoma, Ovary; (B) Metastatic Rectal Adenocarcinoma, Liver; (C) Adenocarcinoma, Colon. These were accompanied by matched normal IP controls and/or mouse IgG IP controls. The objective is to map LINE-1 RNP intera...
ORGANISM(S): Homo sapiens (Human) 
2019-08-23 | PXD013743 | Pride
Lc-msms Patient tumor Line-1 L1 Retrotransposon Crc 
ProteomicsLFQ-MS analysis of nucleosome pulldown experiments with symmetric and asymmetric nucleosomes
Recombinant mononucleosomes were generated carrying H3K4me3 and H3K27me3 in symmetric or asymmetric monovalent or asymmetric bivalent conformation, immobilized on beads and subjected to pulldown assays with mouse ESC nuclear extract. Binding was analyzed by quantitative LFQ-MS.
ORGANISM(S): Mus musculus (Mouse) 
2025-01-02 | PXD015990 | Pride
Chromatin Transcription Histone acetylation Embryonic stem cells Differentiation Bivalent domains Histone methylation 
UnknownLC-MS/MS based characterisation and differential expression of proteins in Himalayan snow trout, Schizothorax labiatus using LFQ technique.
Not available
S-EPMC10287682 | biostudies-literature
TranscriptomicsIdentification of state-specific proteomic and transcriptomic signatures of microglia-derived extracellular vesicles [bulk rna-seq]
Microglia are resident immune cells of the brain that play important roles in mediating inflammatory responses in several neurological diseases via direct and indirect mechanisms. One indirect mechanism may involve extracellular vesicle (EV) release, so that the molecular cargo transported by microg...
ORGANISM(S): Mus musculus 
2023-08-12 | GSE240290 | GEO
GenomicsIdentification of state-specific proteomic and transcriptomic signatures of microglia-derived extracellular vesicles [mirna-seq]
Microglia are resident immune cells of the brain that play important roles in mediating inflammatory responses in several neurological diseases via direct and indirect mechanisms. One indirect mechanism may involve extracellular vesicle (EV) release, so that the molecular cargo transported by microg...
ORGANISM(S): Mus musculus 
2023-08-12 | GSE240294 | GEO
TranscriptomicsIdentification of state-specific proteomic and transcriptomic signatures of microglia-derived extracellular vesicles [rna-seq]
Microglia are resident immune cells of the brain that play important roles in mediating inflammatory responses in several neurological diseases via direct and indirect mechanisms. One indirect mechanism may involve extracellular vesicle (EV) release, so that the molecular cargo transported by microg...
ORGANISM(S): Mus musculus 
2023-08-12 | GSE240293 | GEO
ProteomicsQuantification of ATIs in Wheat by LC-MS/MS – LFQ IonTrap
A selection of ATIs was silenced in the common wheat cultivar Bobwhite and durum wheat cultivar Svevo by RNAi and gene editing, respectively, in order to reduce the amounts of ATIs. The controls and silenced lines were analyzed after digestion to peptides by LC-MS/MS with different approaches to eva...
ORGANISM(S): Triticum aestivum (Wheat) 
2022-10-14 | PXD034769 | Pride
Amylase/trypsin inhibitor  wheat  crsipr-cas9  rnai 
ProteomicsQuantitation of ATIs in Wheat by LC-MS/MS – LFQ Orbitrap
A selection of ATIs was silenced in the common wheat cultivar Bobwhite and durum wheat cultivar Svevo by RNAi and gene editing, respectively, in order to reduce the amounts of ATIs. The controls and silenced lines were analyzed after digestion to peptides by LC-MS/MS with different approaches to eva...
ORGANISM(S): Triticum aestivum (Wheat) Triticum durum 
2022-10-13 | PXD034458 | Pride
Amylase/trypsin inhibitor  wheat  crsipr-cas9  rnai 
ProteomicsQuantification of ATIs in Wheat by LC-MS/MS – LFQ DIA QTOF
A selection of ATIs was silenced in the common wheat cultivar Bobwhite and durum wheat cultivar Svevo by RNAi and gene editing, respectively, in order to reduce the amounts of ATIs. The controls and silenced lines were analyzed after digestion to peptides by LC-MS/MS with different approaches to eva...
ORGANISM(S): Triticum aestivum (Wheat) 
2022-10-13 | PXD034509 | Pride
Amylase/trypsin inhibitor  wheat  crsipr-cas9  rnai 
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