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GenomicsSerine and SAM responsive complex SESAME regulates histone modification crosstalk by sensing cellular metabolism
We report the genome-wide localization of SESAME and found that three SESAME subunits localized in the gene body. Examining the genome-wide localization of SESAME subunits (Sam1, Ser33, Pyk1) and Set1
ORGANISM(S): Saccharomyces cerevisiae 
2015-11-04 | E-GEOD-72972 | biostudies-arrayexpress
Transcriptomics16S rRNA gene sequence analysis of feces samples from rats treated with paclitaxel or vehicle controls
To address the role of gut microbiota in the development of paclitaxel-induced peripheral neuropathy (PIPN), we performed 16S rRNA sequencing analysis of feces samples at 14 days and 28 days after the initiation of paclitaxel or vehicle injections.
ORGANISM(S): Rattus norvegicus 
2023-10-16 | E-MTAB-13426 | biostudies-arrayexpress
MetabolomicsSupplementation of Bacillus sp. DU-106 reduces hypercholesterolemia and ameliorates gut dysbiosis in high-fat diet rats

Gut microbiota modulation by a probiotic is a novel therapy for hypercholesterolemia mitigation. This study initially investigated the potential hypocholesterolemic effect of Bacillus sp. DU-106 in hypercholesterolemic rats and explored its potential relation with gut microbiota. Sprague-Dawley r...

2021-04-08 | MTBLS1168 | MetaboLights
TranscriptomicsRNA-Seq of rat dorsal root ganglions treated with paclitaxel against untreated controls
L4-L5 segment dorsal root ganglion (DRG) samples from controls and the paclitaxel-induced peripheral neuropathy (PIPN) rats were collected at day 14 after the initiation of paclitaxel treatment. Paclitaxel and vehicle were administered intraperitoneally at 2 mg/kg for four consecutive days at a fina...
ORGANISM(S): Rattus norvegicus 
2023-10-16 | E-MTAB-13430 | biostudies-arrayexpress
ProteomicsSaccharomyces cerevisiae LC-MSMS
IP-MS detection of proteins pulled down by Ino80-FLAG by mass spectrometry
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2023-02-07 | PXD035908 | Pride
Lc-msms Saccharomyces cerevisiae 
ProteomicsSaccharomyces cerevisiae，IP-MS detection of proteins pulled down by Ino80-FLAG
IP-MS detection of proteins pulled down by Ino80-FLAG by mass spectrometry
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2023-02-07 | PXD039052 | Pride
Ino80 Saccharomyces cerevisiae，ip-ms 
ProteomicsSaccharomyces cerevisiae，IP-MS detection of proteins pulled down by Rpd3-FLAG
IP-MS detection of proteins pulled down by Rpd3-FLAG by mass spectrometry
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2023-02-07 | PXD039051 | Pride
Rpd3 Saccharomyces cerevisiae，ip-ms 
MetabolomicsSaliva metabolome and microbiome in permanent teeth caries

Metabolites are important determinants of disease progression. In this study, we conducted a case-control study to explore permanent teeth caries-related differences in salivary metabolite profiles and related changes in the composition of the oral microbiota in 200 subjects including 100 caries-...

2024-05-14 | MTBLS4569 | MetaboLights
UnknownNew disease-resistant, seedless grapes are developed using embryo rescue and molecular markers.
Not available
S-EPMC6879691 | biostudies-literature
TranscriptomicsBone marrow gene expression of pediatric acute lymphoblastic leukemia (ALL)
Pediatric acute lymphoblastic leukemia (ALL) contains cytogenetically distinct subtypes that respond differently to cytotoxic drugs. Subtype classification can be also achieved through gene expression profiling. However, how to apply such classifiers to a single patient and correctly diagnose the di...
ORGANISM(S): Homo sapiens 
2009-08-19 | E-GEOD-17703 | biostudies-arrayexpress
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