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TranscriptomicsTime-of-day-dependent light-induction of gene expression in the chicken pineal gland
Light has a strong effect on whole organism physiology, such as the circadian rhythms that are phase delayed and advanced by light given at early and late subjective night, respectively. Despite the importance of the phase-dependent light responses, little is known about the underlying molecular mec...
ORGANISM(S): Gallus gallus 
2011-03-08 | E-GEOD-21915 | biostudies-arrayexpress
ProteomicsA systematic survey of the light-dependent protein quality control in a model cyanobacterium
We conducted a large-scale identification of protein degradation under light or dark condition in the model cyanobacterium Synechocystis PCC 6803 (Hereafter referred as Synechocystis) using the isobaric labeling based quantitative proteomics technique. This is the first discovery about redox-regulat...
ORGANISM(S): Synechocystis sp. PCC 6803 substr. GT-I 
2021-11-10 | PXD023181 | Pride
Synechocystis Pq pool Light-independent Redox Proteomics Light-dependent Protein degradation 
GenomicsLight-dependent expression profiles in WT, DKO, and TKO zebrafish
Light-dependent expression profiles in WT, DKO, and TKO zebrafish
PRJNA437293 | ENA
ProteomicsLight-triggered and phosphorylation-dependent 14-3-3 association with NON-PHOTOTROPIC HYPOCOTYL 3 is required for hypocotyl phototropism
NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3) is a key component of the auxin-dependent plant phototropic growth response. We report that NPH3 directly binds polyacidic phospholipids, required for plasma membrane association in darkness. We further demonstrate that blue light induces an immediate phosphorylati...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2021-10-12 | PXD028530 | Pride
Arabidopsis thaliana Etiolated seedling Blue-light dependent 14-3-3 interactors 
GenomicsCOP1 controls light-dependent chromatin remodeling in Arabidopsis [ChIP-Seq]
COP1 controls light-dependent chromatin remodeling in Arabidopsis [ChIP-Seq]
PRJNA975601 | ENA
GenomicsCOP1 controls light-dependent chromatin remodeling in Arabidopsis [RNA-Seq]
COP1 controls light-dependent chromatin remodeling in Arabidopsis [RNA-Seq]
PRJNA975602 | ENA
GenomicsBlue Light Sensing in Listeria monocytogenes Is Temperature-Dependent and the Transcriptional Response to It Is Predominantly SigB-Dependent
Blue Light Sensing in Listeria monocytogenes Is Temperature-Dependent and the Transcriptional Response to It Is Predominantly SigB-Dependent
PRJNA542147 | ENA
GenomicsThe HY5-NPR1 module governs light-dependent virulence of a plant bacterial pathogen
The HY5-NPR1 module governs light-dependent virulence of a plant bacterial pathogen
PRJNA1284802 | ENA
ProteomicsA deep-sea bacterium senses and utilizes blue light via a BLUF-dependent pathway
Light was a ubiquitous environmental stimulus. Deep-sea microorganisms were exposed to a pervasive blue light optical environment. The utilization of blue light by deep-sea microorganisms, especially non-photosynthetic microorganisms, and the downstream pathway after light reception were obscure. Un...
ORGANISM(S): Spongiibacter sp. CSC3.9 
2022-01-18 | PXD028001 | Pride
Chemotaxis Deep-sea bacterium Bluf Light sensing Blue light 
GenomicsBlue light regulates phosphate deficiency-dependent primary root growth inhibition in Arabidopsis
Blue light regulates phosphate deficiency-dependent primary root growth inhibition in Arabidopsis
PRJNA578386 | ENA
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