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TranscriptomicsGlycan effect on Saccharolytic Human Distal Gut Symbiont, B. thetaiotaomicron
This SuperSeries is composed of the following subset Series: GSE11944: Mucosal Glycan Foraging Enhances the Fitness and Transmission of a Saccharolytic Human Distal Gut Symbiont GSE11953: Mucosal Glycan Foraging Enhances the Fitness and Transmission of a Saccharolytic Human Distal Gut Symbiont: ECF ...
ORGANISM(S): Bacteroides thetaiotaomicron 
2008-11-20 | E-GEOD-11980 | biostudies-arrayexpress
TranscriptomicsGrowth of B. thetaiotaomicron on purified host mucosal glycans and glycan fragments
Bacteroides thetaiotaomicron was grown and transcriptionally profiled on a number of different host mucosal glycans and their component mono- and disaccharides. Experiments are performed in biological duplicate (2 replicates per growth condition). All cultures were harvested at similar points in mid...
ORGANISM(S): Bacteroides thetaiotaomicron 
2008-11-20 | E-GEOD-11962 | biostudies-arrayexpress
TranscriptomicsMucosal Glycan Foraging Enhances the Fitness and Transmission of a Saccharolytic Human Distal Gut Symbiont
Gene expression profiles of Bacteroides thetaiotaomicron in vitro during growth on host mucosal polysaccharides as sole carbon sources. All substrates in this series are derived from porcine gastric mucin and include mucin O-glycans and glycosaminoglycans. Two different culture formats used: 800ml b...
ORGANISM(S): Bacteroides thetaiotaomicron 
2008-11-20 | E-GEOD-11944 | biostudies-arrayexpress
TranscriptomicsMucosal Glycan Foraging Enhances the Fitness and Transmission of a Saccharolytic Human Distal Gut Symbiont: ECF mutant
Growth of isogenic parent ('tdk strain'), 5xECF-sigma factor mutant and complemented mutant strain in the cecum of NMRI inbred mice fed a glycan-restricted, 'simple sugar' diet (35% each glucose and sucrose). Bacteria were collected from mouse distal gut 10 days after colonization. Experiment perfor...
ORGANISM(S): Bacteroides thetaiotaomicron 
2008-11-20 | E-GEOD-11953 | biostudies-arrayexpress
ProteomicsThe butyrate-producing Gram-positive human gut bacterium, Hoskinsella mucinilytica, selectively targets host mucin N-acetylhexosamines
The personalized communities of microorganisms (microbiota) that inhabit the distal guts of humans have evolved to process a variety of complex carbohydrates. Many gut bacteria depolymerize and ferment dietary fiber polysaccharides, mutualistically providing short-chain fatty-acids to their host. So...
ORGANISM(S): Erysipelotrichaceae bacterium 
2026-04-27 | PXD056157 | Pride
Microbiota Mucin Bacteria 
ProteomicsCarbohydrates and the oxidative branch of the pentose phosphate pathway modify Bacteroides thetaiotaomicron phage resistance by phase variable S-layers
The human gut microbiota consists of hundreds of bacterial species, some of which persist in the presence of lytic phage that infect them. Bacteroides employ numerous phase-variable strategies to survive in the presence of phage, including capsular polysaccharides (CPS) and S-layer lipoproteins. We ...
ORGANISM(S): Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) 
2025-08-22 | PXD063111 | Pride
Phage Bacteroides Surface layer 
Genomicsena-DATASET-BLUEPRINT-16-01-2015-10:49:23:886-135 - samples
RNAseq profile of purified plasma cells from multiple myeloma patients and tonsils of healthy donors
EGAD00001001212 | EGA
GenomicsBP_August_2015_RNA-Seq_plasma_cell_on_GRCh38 - samples
RNA-Seq data for 4 plasma cell sample(s). 4 run(s), 4 experiment(s), 4 alignment(s) on human genome GRCh38. Part of BLUEPRINT release August 2015. Analysis documentation available at http://ftp.ebi.ac.uk/pub/databases/blueprint/releases/20150820/homo_sapiens/README_rnaseq_analysis_crg_20150820
EGAD00001001523 | EGA
Genomicsena-DATASET-BLUEPRINT-16-03-2018-14:03:53:512-282 - samples
Analysis of the reference epigenomes and regulatory landscape of CLL as a whole and its major clinico-biological subtypes (with mutated and unmutated IGHV) in the light of the normal B-cell differentiation. We have extensively characterized the reference epigenomes of seven primary chronic lymphocy...
EGAD00001004046 | EGA
Genomicsmultiple_myeloma - samples
Purified plasma cells from bone marrow of Multiple myeloma patient
EGAD00010000672 | EGA
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