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ProteomicsHigh-throughput identification of RNA localization elements reveals a regulatory role for A/G rich sequences
This experiment aims to identify the RNA-binding proteome that is pulled-down from a cellular lysate with biotinylated RNA probes.
ORGANISM(S): Mus musculus (Mouse) 
2022-09-21 | PXD030720 | Pride
Lc-ms/ms 
ProteomicsA massively parallel reporter assay reveals novel features and players of RNA localization in neurons
This experiment aims to identify the RNA-binding proteome that is pulled-down from a cellular lysate with biotinylated RNA probes.
ORGANISM(S): Mus musculus (Mouse) 
2021-04-30 | PXD025492 | Pride
Mpra Pull-down Rna localization 
GenomicsFragment-sequencing unveils local tissue microenvironments at single cell resolution
Fragment-sequencing unveils local tissue microenvironments at single cell resolution
PRJNA892532 | ENA
UnknownAn inherited variant in the gene coding for vitamin D-binding protein and survival from cutaneous melanoma: a BioGenoMEL study.
Not available
S-EPMC4065372 | biostudies-literature
TranscriptomicsGenome-wide analysis of HL60 cells after 24h pulse of 10nM vincristine
Analysis of HL60 response to low-dose vincristine at gene expression level. The hypothesis tested in the present study was that population heterogeneity has functional consequences in drug response. Since the presence of discrete efflux^High and efflux^Low subpopulations may reflect transitions betw...
ORGANISM(S): Homo sapiens 
2013-08-15 | E-GEOD-49869 | biostudies-arrayexpress
TranscriptomicsBCL9/9L-β-catenin Signaling is Associated With Poor Outcome in Colorectal Cancer
Canonical Wnt signaling output is mediated by β-catenin, which interacts with LEF/TCF transcription factors and recruits a general transcriptional activation complex to its C-terminus. Its N-terminus binds BCL9/9L proteins, which bind co-activators that in mammals contribute to fine-tuning the tran...
ORGANISM(S): Mus musculus 
2015-11-08 | E-GEOD-60837 | biostudies-arrayexpress
TranscriptomicsRNA seq of prostate gland from WT, PTEN pc -/- and PTEN pc-/-;P53 -/- mice
Acute Pten loss initiates prostate tumorigenesis characterized by cellular senescence response. Senescent cells secrete a variety of pro inflammatory factors in the tumor microenvironment, which can support the survival, outgrowth and migration of tumor cells. Here we examine cytokines and cytokines...
ORGANISM(S): Mus musculus 
2020-10-09 | E-MTAB-9624 | biostudies-arrayexpress
TranscriptomicsSingle cell sequencing analysis of senescence in Mus musculus prostate cancer models
Acute Pten loss initiates prostate tumorigenesis characterized by cellular senescence response. Here we examine the cellular senescence response in epithelial individual cells, by single-cell RNA sequencing (scRNAseq) in Ptenpc-/- and Ptenpc-/-; Timp1-/- GEMMs. ScRNAseq analysis determines a cluste...
ORGANISM(S): Mus musculus 
2020-10-09 | E-MTAB-9578 | biostudies-arrayexpress
UnknownInherited variation in the PARP1 gene and survival from melanoma.
Not available
S-EPMC4106984 | biostudies-literature
UnknownGenome-wide association meta-analyses combining multiple risk phenotypes provide insights into the genetic architecture of cutaneous melanoma susceptibility.
Not available
S-EPMC7255059 | biostudies-literature
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