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ProteomicsHeLa mRNA interactome
Pull-down of poly(A)-mRNA cross linked proteins using two cross-linking methods (conventional cross-linking and PAR-cross-linking) to identify all mRNA-binding proteins (GO:0003729). The provided data is quantitative proteomic data for comparison of cross-linking and control samples.
ORGANISM(S): Homo sapiens 
2012-08-14 | E-MTAB-869 | biostudies-arrayexpress
ProteomicsmRNA-binding proteins of Leishmania donovani LC-MSMS
Leishmania are unicellular eukaryotes responsible for leishmaniasis in humans. Like other trypanosomatids, leishmania regulate protein coding gene expression almost exclusively at the post-transcriptional level with the help of RNA binding proteins (RBPs). Due to the presence of polycystronic trans...
ORGANISM(S): Leishmania donovani 
2017-02-08 | PXD005601 | Pride
Lc-msms Mrna-binding proteins Leishmania donovani Interactome capture 
OtherInsights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Data from ProteomeXchange, PXD ID: PXD002880. Experiment: KS_A4_3, file: folder summary. Published as part of Cell. 2012 Jun 8;149(6):1393-406 . From the Abstract: {{i}} RNA-binding proteins (RBPs) determine RNA fate from synthesis to decay. Employing two complementary protocols for covalent UV cro...
ORGANISM(S): Homo_sapiens_viruses, Human_female 
GPM11210041750 | GPMDB
Resource Reanalysis 
ProteomicsmIMCD RBPome and Proteome - We characterize the mRNA protein interactome of ciliated kidney tubular epithelial cells and we studied its modulation during hypoxia
We characterize the mRNA protein interactome of ciliated kidney tubular epithelial cells and we studied its modulation during hypoxia
ORGANISM(S): Mus musculus (Mouse) 
2019-02-15 | PXD010530 | Pride
Mrna interactome Mouse kidney tubuli cells 
ProteomicsmRNA binding - Insights into RNA biology from an atlas of mammalian mRNA-binding proteins
RNA-binding proteins (RBPs) determine RNA fate from synthesis to decay. Employing two complementary protocols for covalent UV crosslinking of RBPs to RNA, we describe a systematic, unbiased, and comprehensive approach, termed "interactome capture," to define the mRNA interactome of proliferating hum...
ORGANISM(S): Homo sapiens (Human) 
2015-09-11 | PXD002880 | Pride
Mrna binding 
GenomicsThe cytoplasmic SYNCRIP mRNA interactome of mammalian neurons
The cytoplasmic SYNCRIP mRNA interactome of mammalian neurons
PRJNA629120 | ENA
GenomicsUnravelling Role of miRNA-mRNA Interactome in Pathophysiology of Arrhythmogenic Cardiomyopathy [mRNA-seq]
Unravelling Role of miRNA-mRNA Interactome in Pathophysiology of Arrhythmogenic Cardiomyopathy [mRNA-seq]
PRJNA1141385 | ENA
ProteomicsMudPIT analysis of the mRNA interactome from Plasmodium falciparum
The Plasmodium falciparum strain 3D7 was cultured in human O+ erythrocytes at 5% haematocrit as previously described (Trager and Jensen, 1976). Cultures were synchronized twice at ring stage with 5% D-sorbitol treatments performed eight hours apart (Lambros and Vanderberg, 1979). Cultures (8% parasi...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Plasmodium Falciparum 3d7 (ncbitaxon:36329) 
2016-03-29 | MSV000079612 | MassIVE
ProteomicsHL-1 mRNA interactome - The Cardiomyocyte RNA-Binding Proteome: Links to Intermediary Metabolism and Heart Disease
RNAsfunction as compositionally diverse ribonucleoprotein (RNP) comlplexes, formed through interactions with RNA-binding proteins (RBPs). We explored the murine cardiomyocyte RBP repertoire.
ORGANISM(S): Mus musculus (Mouse) 
2016-08-17 | PXD002541 | Pride
Mrna interactome 
ProteomicsPhosphorylation-dependent Regnase-1 interactome
In this study, we exploited interactome-based approach to isolate Regnase-1 protein complexes and found that TLR-ligand, IL-1β, or IL-17 stimulation induces formation of the Regnase-1-14-3-3 or -βTRCP complex in a mutually exclusive manner.
ORGANISM(S): Homo Sapiens (human) 
2021-10-12 | PXD026561 | JPOST Repository
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