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TranscriptomicsExpression profile of the M-bM-^@M-^\heat-inducible N-degronM-bM-^@M-^] of Nab2 (nab2-td)
Gene expression in eukaryotes is an essential process that includes transcription, pre-RNA processing and RNA export. All these steps are coupled and normally, any failure in one step affects the other steps and could cause nuclear mRNA retention. One important player in this interface is the poly(A...
ORGANISM(S): Saccharomyces cerevisiae 
2011-12-01 | E-GEOD-19302 | biostudies-arrayexpress
ProteomicsNab2 Drosophila pupal brain LC-MSMS
We exploit the predictable time course of Drosophila brain development to perform a temporally coupled quantitative proteomic analysis of the pupal brain in Nab2 mutant or overexpression models, which reveals that Nab2 is required to regulate the abundance of a number of proteins with critical roles...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2022-02-17 | PXD022984 | Pride
Nab2 Lc-msms Drosophila melanogaster 
TranscriptomicsRNA immunoprecipitation coupled to RNA-sequencing of Plasmodium berghei NAB2::mCherry parasites.
Identification of RNAs directly bound by malarial NAB2
ORGANISM(S): Plasmodium berghei 
2021-09-03 | E-MTAB-10773 | biostudies-arrayexpress
TranscriptomicsExpression profile of nab2-1 mutant
Gene expression in eukaryotes is an essential process that includes transcription, pre-RNA processing and RNA export. All these steps are coupled and normally, any failure in one step affects the other steps and could cause nuclear mRNA retention. One important player in this interface is the poly(A...
ORGANISM(S): Saccharomyces cerevisiae 
2011-12-01 | E-GEOD-26303 | biostudies-arrayexpress
ProteomicsIdentification of GBP2- and NAB2-interacting proteins in malaria parasites
The quality control and export of mRNA by RNA-binding proteins are necessary for the survival of malaria parasites, which have complex life cycles. Malarial nuclear poly(A) binding protein 2 (NAB2), ALWAYS EARLY (ALY) and serine/arginine-rich (SR) proteins, such as nucleolar protein 3 (NPL3), G-stra...
ORGANISM(S): Plasmodium berghei ANKA 
2021-11-03 | PXD027302 | Pride
Lc-ms/ms 
TranscriptomicsTranscription profiling by array of Nab2 depletion effect on yeast mRNA
Transcription profiling was performed on the time course of Nab2 protein depletion in THC-Nab2 strain at 0h, 7h, 12h in biological triplicates to access its affect on the composition and structure of mRNA in budding yeast. For the protein depletion experiment THC-NAB2 (THJ collection Y2484, THC-NAB2...
ORGANISM(S): Saccharomyces cerevisiae 
2013-01-11 | E-MTAB-981 | biostudies-arrayexpress
GenomicNAB2-STAT6 Gene Fusions in Solitary Fibrous Tumor by Integrative Sequencing

Transcriptome sequencing of solitary fibrous tumors / hemangiopericytomas from a variety of anatomic sites revealed recurrent gene fusions between two genes, NAB2 and STAT6. All SFTs examined exhibited an in-frame fusion transcript encoding a fusion protein containing the EGR1 interaction domain ...

phs000567 | dbGaP
ProteomicsS. cerevisiae Nab2-PrA interactomes in exosome, transport and ribosome biogenesis mutant backgrounds
RNA-binding proteins (RBPs) are key mediators of RNAbiogenesis and metabolism. An RBP can be dedicated to a specific transcript class (e.g. mRNAs) or function broadly across both coding and non-coding RNAs. Consequently, nuclear RNA homeostasis requires maintenance of bothRBP binding specificity and...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2020-10-08 | PXD021855 | Pride
Exosome Ribosome biogenesis Rna processing Polyadenylation Rna homeostasis 
GenomicsLactiplantibacillus plantarum strain:NAB2
Lactiplantibacillus plantarum strain:NAB2 Genome sequencing and assembly
PRJNA314120 | ENA
GenomicsIdentification of Recurrent NAB2-STAT6 Gene Fusions in Solitary Fibrous Tumor by Integrative Sequencing

Transcriptome sequencing of solitary fibrous tumors / hemangiopericytomas from a variety of anatomic sites revealed recurrent gene fusions between two genes, NAB2 and STAT6. All SFTs examined exhibited an in-frame fusion transcript encoding a fusion protein containing the EGR1 interaction domain ...

phs000567.v1.p1 | EGA
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