Sort   by:  
 Page size 
ProteomicsIdentification of proteins synthesized from long-lived mRNAs during seed germination in rice
To identify the proteins synthesized from long-lived mRNAs at early phase of germination, proteome of embryos at 0 DAI (dry embryos), 1 DAI with α-amanitin and 1 DAI without α-amanitin were analyzed by using LC-MS/MS.
ORGANISM(S): Oryza sativa (Rice) 
2019-08-13 | PXD013628 | Pride
Α-amanitin Imbibition Embryo Rice 
ProteomicsSWI1 in vitro phosphorylation - SWITCH 1/DYAD is a WINGS APART-LIKE antagonist that maintains sister chromatid cohesion in meiosis
To verify if CDKA;1 phosphorylates SWI1, recombinant proteins were prepared using E.coli system and in vitro kinase reactions were performed.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Escherichia coli 
2019-04-25 | PXD009959 | Pride
Arabidopsis Swi1 Phosphorylation 
ProteomicsApoplastic proteome upon powdery mildew Bgh challenge
In order to identify the key factors that are crucial for non-host resistance against Bgh and are secreted depending on SYP4-mediated membrane trafficking, we have performed apoplastic fluid preparation of a series of mutants defective in the SYP4 pathway. This project aims to identify proteomic pro...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-01-11 | PXD009099 | Pride
Arabidopsis Apoplast Bgh 
ProteomicsCircadian profiling of the Arabidopsis proteome using 2D-DIGE
Clock-generated biological rhythms provide an adaptive advantage to an organism which results in increased fitness and survival. To better elucidate the plant response to the circadian system, we surveyed protein oscillations in Arabidopsis seedlings under constant light. Using large-scale two-dimen...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2016-06-29 | PXD004276 | Pride
Arabidopsis Circadian clock 2d-dige 
ProteomicsPlant Lipids Mediate Immune Responses to Fungal Lipids in Barley
Lipids play crucial roles in plant-microbe interactions, functioning as structural components, signaling molecules, and microbe-associated molecular patterns (MAMPs); however, the mechanisms underlying lipid perception and signaling pathways in plants remain largely unknown. This study investigates ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2025-01-31 | PXD056788 | Pride
Pattern-triggered immunity Serendipita indica Ergosterol Phosphatidylinositol phosphate Phosphatidic acid Lipid signaling 
ProteomicsGene modification by fast-track recombineering for cellular localization and isolation of components of plant protein complexes
Genes encoding Arabidopsis subunit homologs of TFIIH kinase module were labelled with coding sequences of GFP and mCherry (green and red fluorescent proteins) using fast-track recombineering. To illustrate the applicability of recombineering for accelerating the isolation and identification of plant...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-08-01 | PXD013637 | Pride
Arabidopsis thaliana Fast-track recombineering Ip-ms 
ProteomicsUstilago maydis disrupts carbohydrate signaling networks to induce hypertrophy in maize mesophyll cells (total and phospho proteome data)
Ustilago maydis is a biotrophic fungus that infects arial parts of maize, secreting effector proteins to facilitate host colonization and manipulate cellular processes, creating nutrient-rich environments for its growth and reproduction. Here, we identified three effectors (Hap1-3; hypertrophy-assoc...
ORGANISM(S): Zea mays (Maize) 
2026-01-28 | PXD057676 | Pride
Ustilago maydis Zea mays Hypertrophy Snrk1 Plant immunity 
ProteomicsActive protein ubiquitination regulates xylem vessel functionality
Xylem vessels function in the long-distance conduction of water in land plants. The NAC transcription factor VASCULAR-RELATED NAC-DOMAIN7 (VND7) is a master regulator of xylem vessel cell differentiation in Arabidopsis (Arabidopsis thaliana). We previously isolated seiv (suppressor of ectopic xylem ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2024-10-17 | PXD048830 | Pride
Vnd7 Xylem vessel Ubiquitination 
ProteomicsIn planta bacterial multi-omics illuminates regulatory principles underlying plant-pathogen interactions
Gene regulation of bacterial pathogens in the host is not comprehensively understood due to the difficulty in analyzing genome-wide mRNA and protein expression of bacteria during infection. Here, we jointly analyzed transcriptome and proteome of a foliar bacterial pathogen in plants. Bacterial trans...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2020-04-30 | PXD015839 | Pride
Multi-omics Bacterial virulence Plant immunity 
ProteomicsRole of CHR4 during floral transition
Several pathways conferring environmental flowering responses in Arabidopsis converge on developmental processes that mediate floral transition in the shoot apical meristem. Many characterized mutations disrupt these environmental responses, but downstream developmental processes have been more refr...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2020-03-02 | PXD016457 | Pride
Arabidopsis Chromatin remodeling 4 (chr4) Apetala1 (ap1) Squamosa promoter binding protein-like family Flowering-time Mads-box transcription factors 
Sort   by:  
 Page size