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ProteomicsDeep proteome analysis by DIA-MS
To expand proteome coverage, the MS range in DIA-MS was examined. In addition, we analyzed host proteins in the feces of control and repeated social defeat stress (R-SDS) model mice by DIA-MS with an optimal MS range.
ORGANISM(S): Homo Sapiens (human) Mus Musculus (mouse) 
2022-04-28 | PXD032698 | JPOST Repository
ProteomicsDeep proteome analysis by DIA-MS with FAIMS
We aimed to expand the proteome coverage by single-shot measurements using optimizing high-field asymmetric waveform ion mobility spectrometry (FAIMS) parameters in DIA-MS. In addition, we analyzed host proteins in the feces of control and repeated social defeat stress (R-SDS) model mice with optima...
ORGANISM(S): Homo Sapiens (human) Mus Musculus (mouse) 
2022-04-28 | PXD029853 | JPOST Repository
TranscriptomicsTranscription profiling of different regions of E16.5 mouse cerebral cortex to identify region- and layer-specific genes.
The mammalian neocortex develops layer organizations with regional differences represented by expression of multiple genes at embryonic stages. These genes could play important roles in the formation of areal cyto-architecture, yet, the number of genes identified so far is not sufficient to explain ...
ORGANISM(S): Mus musculus 
2007-12-13 | E-GEOD-929 | biostudies-arrayexpress
UnknownChallenges with sirolimus experimental data to inform QSP model of post-transplantation cyclophosphamide regimens.
Not available
S-EPMC11334299 | biostudies-literature
ProteomicsIn-depth proteome analysis of Hela cell culture conditioned media containing fetal bovine serum.
We performed DIA-MS based proteomic analysis of Hela cells conditioned media containing fetal bovine serum by albumin (Alb)-depletion and non-depletion. In addition, we attempted to enrich secreted proteins by reducing the volume of culture medium (10mL, 5mL and 2mL). The supernatants of each cultur...
ORGANISM(S): Homo Sapiens (human) 
2022-02-22 | PXD024272 | JPOST Repository
ProteomicsEvaluation of suitability of dried saliva spots for in-depth proteome analyses of clinical applications
We performed a single-shot DIA-MS proteome analysis of dried saliva spots (DSS) to investigate whether it provides a platform to complement the dried blood spot (DBS) data.
ORGANISM(S): Homo Sapiens (human) 
2022-04-26 | PXD031181 | JPOST Repository
ProteomicsEvaluation of suitability of dried saliva spots for in-depth proteome analyses of clinical applications - Additional file
We performed a single-shot DIA-MS proteome analysis of dried saliva spots (DSS) to investigate whether it provides a platform to complement the dried blood spot (DBS) data.
ORGANISM(S): Homo Sapiens (human) 
2022-04-26 | PXD032116 | JPOST Repository
UnknownGenome-wide association study identifies a new SMAD7 risk variant associated with colorectal cancer risk in East Asians.
Not available
S-EPMC4051826 | biostudies-literature
ProteomicsCritical Vulnerabilities of the NuRD Complex for Fetal Hemoglobin Control
High-resolution CRISPR functional genomics reveals critical vulnerabilities of the NuRD complex for fetal hemoglobin control
ORGANISM(S): Homo sapiens (Human) 
2019-05-22 | PXD009793 | Pride
Mta2 bioid chd4 
ProteomicsUltra-fast proteome analysis of HEK293T cells using Q-Orbitrap MS
We established an ultrafast proteomic method based on a 5-min gradient LC and quadrupole-Orbitrap mass spectrometer.
ORGANISM(S): Homo Sapiens (human) 
2022-07-28 | PXD034227 | JPOST Repository
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